Candidatus Pelagisphaera phototrophica: GA004_15375
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Entry
GA004_15375 CDS
T09061
Symbol
pth
Name
(GenBank) aminoacyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppht03012
]
GA004_15375 (pth)
Enzymes [BR:
ppht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
GA004_15375 (pth)
Translation factors [BR:
ppht03012
]
Eukaryotic type
Release factors
GA004_15375 (pth)
Prokaryotic type
GA004_15375 (pth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
DUF5866
Motif
Other DBs
NCBI-ProteinID:
QXD31682
LinkDB
All DBs
Position
complement(3541955..3542566)
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AA seq
203 aa
AA seq
DB search
MSYRLIVGLGNPGSEYKQTRHNIGFQVLDNFASKQGASAWSKNRNLKGDLSVFVPELDAK
IYLLKPLTFMNESGVSIQKVCSYYRIPPEEVVVVYDEINLGLGEVKVSTSGGPGGHNGLS
DIASRIKPTFTRFRIGIGQKTPKEMSLADYVLGKFSKEDEILISAFMERYLDCLDRLIRE
GADKAMIHINRKPKTKDREDGQL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcggcttattgtcggtcttggtaatcctggtagcgagtacaaacagactcgc
cacaatattggatttcaagttctcgacaacttcgcatcgaagcaaggcgctagtgcgtgg
tcgaaaaaccgcaatttaaaaggagacctttctgttttcgtccctgaattggatgcgaag
atctatttgcttaaaccactcacgtttatgaatgagagtggtgtcagtatccagaaggtt
tgcagctactataggataccgcctgaagaagtcgtcgtcgtatacgacgaaatcaaccta
ggtttaggcgaggtaaaggtcagcacctcagggggtcccggaggccacaacggcctcagt
gatatcgcatctcgtattaagccgacctttacgcgctttaggataggcattggccaaaag
acgccaaaggaaatgagtcttgcggattacgtattgggaaaatttagtaaggaagacgaa
atcttaattagcgctttcatggagcgttatctcgattgcctcgacaggttgatacgagag
ggagccgacaaggcgatgattcacataaaccgaaaaccgaaaaccaaagacagagaagat
ggccaactataa
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