Candidatus Pelagisphaera phototrophica: GA004_15540
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Entry
GA004_15540 CDS
T09061
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GA004_15540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_15540
Transporters [BR:
ppht02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GA004_15540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_16
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QXD31709
LinkDB
All DBs
Position
complement(3569846..3571756)
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AA seq
636 aa
AA seq
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MLYKGERIGISIIENKLKEILRPGTNASGDVGNLLLTRWMLSLCWQFRRLFALAAILQVA
LTLFAVFGLNVVGLGIDYLAFVSGMREAGPAWPLGWQPPAGWTPMEVILLLSSVALLSAV
AHGLLFYGAAASTAKLVHGKLAPQLQRQVFGKLQEGCMRFYSKQPSGAMINRATGDIQAV
RSFVDLALMEAITLIITVSIYVVFMYKIHSLLALACMIFVPLMALRSLAFSQTTRPLFIS
YREAFDRMILYLSEAIRGAEVIRGFSVEDQAIDRMRNMNKDIWECQSRIFRSISLFGPSI
NLLSHASLFALIIYGGHLVISGQLALGAGFVVFAGLLQQFANRIANVAQIANATQESLTG
ARRLHDILNTEPSVQQPDNPLTPQPFTGRVRFDRVTVSYNETRNALSEVDFEVEPGEIVA
LAGETAAGKSSLLNLIPRLYDPDRGIVSVSGVDARRLDLQCLRRNVGVVFQDAFIFSQSI
AENIRFGNAEAPMELVVKAAKIACANEFIVDLENGYDTIIGEMGVDLSGGQRQRLSIARA
LLPDPKILLLDDPTSAIDPRTEKRIFDGLKNEMSEKTTFIVAHRVSTLARADRIIVMKEG
RIVEIGAHDELMGQSGAYSEMVATQFGSLLDREVTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
ttgctctataagggcgagagaattgggatctctattatcgaaaacaaacttaaggaaatt
ctaagaccgggaaccaatgctagtggcgacgtcggaaacctattactgactcgctggatg
ctaagcctttgctggcaattcagaagattgttcgccttggctgcgattctccaagttgcc
ttaacattgtttgcggttttcggattgaatgtagttggcctgggaatcgattacctggcc
ttcgtgtctggcatgcgtgaggctggtcctgcctggccactgggctggcaaccacctgca
ggctggacgccgatggaagtgattcttttgctgtccagcgtagcgttgctttccgctgtt
gcccacgggcttctcttttatggagcggccgcttccactgccaagcttgtgcacgggaaa
ttggccccgcagttgcagcgccaagtattcggcaagctccaggaaggctgcatgcgattc
tattccaagcagccaagcggggctatgatcaatcgggctactggagatatccaagcagtt
cggtcgttcgtggacttggccttgatggaagcgattacgcttataattaccgtctctatc
tacgtagtattcatgtataagatacacagcctactggctcttgcttgcatgattttcgtg
ccgctaatggctttgaggtcactcgctttttctcagaccacgcgcccgctgttcatttcc
taccgtgaagcgttcgaccgaatgatactctatttgtcggaagccatcagaggggccgaa
gttatccgtggattctctgttgaagatcaagcaatcgacagaatgaggaatatgaataag
gatatttgggaatgccagagccgtatattccgtagcatcagtctcttcggtccgagtatc
aaccttttgtcgcacgccagtctgttcgccctaatcatctacggcggacacttagtgatc
tccgggcaattggcgctgggagctggattcgtcgttttcgctggactgctccagcagttc
gccaaccgcatagccaacgtggctcagattgctaatgccactcaagaaagccttacaggg
gccaggaggttgcatgatattttgaataccgagccttcagtgcaacagccagataatccg
ctgacacctcaaccgtttaccggacgggtgcgctttgatcgcgttacggtttcctacaat
gaaactagaaacgctctttctgaggttgatttcgaggtggaacccggtgaaatcgtggcc
ttggctggtgagactgcagcgggcaagagctctttattgaacttgattccgagactttat
gatccggatcgagggattgtttccgttagtggcgtagacgctcgaagactagatcttcaa
tgcttgcgaagaaatgttggagtcgtttttcaagatgcgtttatattcagccagtcgata
gccgaaaacatacgattcggcaatgctgaggctccaatggaactagtggttaaggcagcg
aagatcgcttgcgcaaacgagtttattgtagatttggaaaatggatacgatacaattatc
ggagagatgggagtcgacctgtctggagggcaaaggcagcgtcttagtattgccagagca
ttattgccagatccgaagattctgctcttagacgatccgacttcagccatcgatcccaga
acggaaaagcgcattttcgacggacttaaaaacgagatgtcggaaaagacgactttcatc
gtggctcatcgcgtatccacattggcccgagccgatcgcattatcgttatgaaggaaggc
cgtatcgtcgagattggcgcccacgatgaactgatgggtcaatccggagcttattcggaa
atggtggcaacccagtttggatccttgctcgatcgagaggtaaccgtatga
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