Candidatus Pelagisphaera phototrophica: GA004_15870
Help
Entry
GA004_15870 CDS
T09061
Symbol
asnS
Name
(GenBank) asparagine--tRNA ligase
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GA004_15870 (asnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppht01007
]
GA004_15870 (asnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppht03016
]
GA004_15870 (asnS)
Enzymes [BR:
ppht01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
GA004_15870 (asnS)
Amino acid related enzymes [BR:
ppht01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GA004_15870 (asnS)
Transfer RNA biogenesis [BR:
ppht03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GA004_15870 (asnS)
Prokaryotic type
GA004_15870 (asnS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QXD31771
LinkDB
All DBs
Position
complement(3639348..3640733)
Genome browser
AA seq
461 aa
AA seq
DB search
MSHKRTEISILLESESERENVLIQGWVRTRRDSKDFFFLELNDGSCLKNLQIVVTREISE
FETLKTIRTGSSVSVVGNLVASQGKGQKWEAMAKEVALLGDSPENYPLQKKRHSLEFMRE
ISHLRPRANMFGAVFRIRSRLSFAIHRYFQKNGFFYVNTPVITASDCEGAGDLFKVTTID
MHEPPRSEDGLIDFAHDFFSQKTYLTVSGQLEGEAFATSLGKIYTFGPTFRAENSNTSRH
ASEFWMVEPEIAFCDLQQDMDCAESFVKWVTREVLDTCQSDLELFFNFVDKGLEERLRFV
VERPFHRVSYTEAIDILHASGKKWEYPAEWGANLQSEHERYLTEEHFKSPVTVYDYPKEI
KPFYMRTNDDEKTVAAMDVLVPGIGEIVGGSQREERLDVLLENMKHHCISEEDYSWYVDL
RRFGSVPHAGFGLGFERLLMFITGMGNIRDVIPFARTPGSI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcacataagaggactgaaatatcgattttgctcgaaagcgaaagcgaacgtgaaaac
gttcttattcaaggttgggtgcgtacgcggcgcgattccaaggacttcttttttctcgag
ctcaatgacggctcgtgtctcaagaatctccagatcgtggtcacgcgggaaatcagcgag
tttgagacgctaaaaacgattcgaacgggttcctcagtgtcggtagtcggcaatcttgtc
gcttctcaggggaaggggcagaaatgggaggctatggccaaagaggttgcgcttttggga
gactcgcctgaaaactacccattgcagaaaaagcgtcactcgctcgagttcatgcgggag
atatcccacctcagaccgagagcgaacatgttcggcgccgttttcaggattcgaagccga
ctgtcctttgcgattcatcggtatttccagaaaaacgggtttttctatgtgaatacaccc
gttataaccgcgagcgattgcgagggagcgggggacctgttcaaggtcacaacgatcgac
atgcacgagcctccgaggtcggaggatggactcatcgactttgcccacgatttcttctcc
cagaaaacctatctaacggtgagcggtcaacttgaaggggaggccttcgcgacatcgttg
ggcaaaatctacacgtttgggcctacgtttcgggctgagaattcgaatacatcgcgtcat
gcgagcgagttttggatggttgaacctgaaatagcgttttgcgatttgcagcaagatatg
gattgcgcggaaagctttgtaaaatgggttactcgggaagtgttggatacctgccaatcg
gatctggagttgttctttaactttgtggacaaggggctggaagagcgccttcgatttgta
gttgagcgtcccttccaccgcgtttcctacacggaagccattgatatccttcacgcttcc
ggcaagaagtgggagtatccagccgagtggggggctaatctccagtccgaacatgagcgg
tatctgacggaggagcattttaaaagcccagtgaccgtctacgactacccgaaagaaatt
aagccgttttatatgcggactaatgacgacgaaaagacagtggctgccatggacgttctg
gttcctggcataggcgagattgtgggaggaagccagcgggaggaaagactggatgttctt
ttggaaaacatgaagcaccactgtatcagcgaagaagactatagctggtatgtcgattta
aggcgtttcggtagcgtgcctcacgcgggctttgggcttgggtttgagaggctgctgatg
tttattacaggtatgggcaatatcagggatgtgattccctttgcccggacgccagggagt
atttga
DBGET
integrated database retrieval system
