Candidatus Pelagisphaera phototrophica: GA004_16475
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Entry
GA004_16475 CDS
T09061
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00523
Polyketide sugar unit biosynthesis
ppht01110
Biosynthesis of secondary metabolites
ppht01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GA004_16475
Enzymes [BR:
ppht01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
GA004_16475
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NmrA
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QXD31884
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Position
3752553..3753656
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AA seq
367 aa
AA seq
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MSEKVLITGGCGFVGSHLADEYLKQGYQVRILDNLDPIVHGHIKAPPSYVNKEAEFVYGD
IRDTNLLSKCLEKISVVSHQAAAVSVMQSMWNPTKYAEVNTLGTAKLLELLVDRNRYPIK
KLIIPSSMSIYGEGLYKQNDNEVFPNLREREQLERGTWELEWDKKPCSHVPTHEDKPLRP
TSIYAITKRDQEEMAISIGREYSIPVVALRYFNIYGRRQSLSNPYTGVAAIFSSRILNGN
APVVFEDGAQLRDFVHISDIVRANLLATQKDAGDYQVFNIGSGQPISILEVANKVIDSFE
KDFSAKVTGTARPGDIRHCYADISRAREILGYTPNANFDSSIQELIEWVKTQSAPDNFET
AYKQFGI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaggtactaataaccggtgggtgcggattcgtaggatcccatctggcggac
gaatatttgaaacaaggctaccaggtacggattttggacaatctagatccaatagtacat
gggcacatcaaagcgcccccttcctacgtaaacaaagaggctgagtttgtttacggggac
ataagggatacgaacttactatcaaagtgccttgaaaaaatttctgtagtatcgcatcaa
gcggcagccgtcagtgtgatgcagtcgatgtggaacccaaccaagtatgcagaagtaaat
accttgggaacagccaaactactcgaattactcgtcgaccgaaaccgttatcctataaaa
aaattgatcataccctcttccatgtctatctatggtgaggggttatacaaacaaaacgat
aacgaagtattccctaaccttcgagaaagagagcaactagagcgtgggacttgggaatta
gaatgggacaaaaaaccttgttcccatgtaccgacccatgaagacaaacctcttcgtcca
acatcaatctacgctattacaaaacgtgatcaggaagaaatggcgatctcgataggcagg
gaatatagcattcctgttgtcgctcttcgctatttcaatatttacgggagacgccaatcc
ctttcaaatccgtatacgggtgtcgccgcgatattcagcagtcgaatcctcaatggtaat
gcaccggttgtatttgaggacggggcacaactgcgagatttcgtacacataagcgacatc
gttcgagcaaacctgctcgcaactcagaaagacgcaggcgactaccaggttttcaatatc
ggttcgggtcagccgatatccattttggaggtcgcgaacaaagtaatagattcattcgaa
aaagatttctcagcaaaagtaacaggaaccgcacgaccgggagacatacggcattgctat
gccgatatatcaagggcgagagagatcctaggctatactccgaatgcgaattttgattct
tcaatccaagaacttatcgagtgggtaaagacccaatcagccccagataattttgaaacc
gcttacaagcaattcggaatataa
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