Candidatus Pelagisphaera phototrophica: GA004_16510
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Entry
GA004_16510 CDS
T09061
Name
(GenBank) SDR family oxidoreductase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00520
Amino sugar and nucleotide sugar metabolism
ppht01100
Metabolic pathways
ppht01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
GA004_16510
Enzymes [BR:
ppht01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
GA004_16510
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QXD31891
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All DBs
Position
complement(3762371..3763303)
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AA seq
310 aa
AA seq
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MRILITGGAGFLGSHLADRLLEDGNEIICMDNLFTGSKRNIAHLVQNPNFEFLRHDVIDP
FKLEVDQIYNLACPASPVHYQYNAIKTIKTSVMGAINCLGLAKRVNARVFQASTSEVYGD
PEVHPQPESYWGSVNPIGIRSCYDEGKRCAETLFFDYHRQNGVDIRIVRIFNTYGPRMSP
QDGRVVSNFIVQALRGEDITIFGDGSQTRSFCYYSDLIDGFVRLMEQDKLEGPVNIGNPG
EFTMLELAEKVIHLTGTQSRIVYEALPEDDPKQRQPDIELARTELGWEPRVSLDEGLVET
IDYFRSYLDS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctaattacaggcggggcaggttttcttggcagtcatttagcggatcgactg
cttgaggatgggaacgagatcatttgcatggacaacctctttacgggctcgaagaggaat
atcgcgcacctggtacagaatccgaactttgaatttttgcggcacgacgtgatagatccc
tttaaactagaggtggatcagatctacaatttggcctgtccggcgtctcccgtgcattac
cagtataatgcgatcaagacgattaaaacttcagtgatgggagcaattaattgccttggc
ttggcgaagcgagtaaacgcccgcgtgttccaggcgtccacttctgaggtatatggtgat
ccagaggttcatccacagccggaatcgtattgggggagcgttaatccgattggaattcgg
tcgtgctatgacgagggcaaacgttgtgcggaaactctatttttcgactatcaccggcaa
aacggggtcgatattcgcatcgtacgcatcttcaatacttacgggccgcgaatgtcgccg
caagatggtcgagtggtttcaaattttatagtacaggccctcaggggcgaagacatcacg
atcttcggcgacggttcccagacccgttcgttctgctactacagtgatttgatcgacggt
ttcgtccgtttaatggagcaggacaaactggaaggacctgtaaacattgggaacccgggt
gaattcacgatgcttgaactcgctgaaaaagtgatccatctgacggggactcagtccaga
atcgtgtatgaagcgttgcctgaggatgacccgaaacagcgccagccagatatcgaactc
gccaggacggagttaggatgggagcccagagtttccctagatgagggtttggtagaaacg
atcgactattttaggtcttatttggatagctag
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