Candidatus Pelagisphaera phototrophica: GA004_16780
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Entry
GA004_16780 CDS
T09061
Symbol
rplA
Name
(GenBank) 50S ribosomal protein L1
KO
K02863
large subunit ribosomal protein L1
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GA004_16780 (rplA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppht03011
]
GA004_16780 (rplA)
Ribosome [BR:
ppht03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
GA004_16780 (rplA)
Bacteria
GA004_16780 (rplA)
Archaea
GA004_16780 (rplA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L1
McpB_HAMP_2
7TM_GPCR_Srab
Motif
Other DBs
NCBI-ProteinID:
QXD31939
LinkDB
All DBs
Position
complement(3809482..3810174)
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AA seq
230 aa
AA seq
DB search
MVKLTKRFRAAQEAADLSKEYTVEEAVETLAKFPKAKFDETVELSMKLLVDPRKGEEMVR
GTVMLPHGSGKTVRVLAFTSDVEAAKAAGATEAGLEDMIEKVQGGWVDFDVAVATPDAMK
EVRKIARVLGPKGLMPNPKAGTVSPDIDKAIKEVMAGRVEFKLDKSATLGVGVGKRSFSK
EQIAENVNAILDAIGKARPAGFKGRYIRSASISGTMTPGLKIAGSEYSKY
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggttaaactgactaaacgttttcgagcggcgcaagaggccgccgatttaagtaaagaa
tatacggtcgaagaggctgtcgaaactttggcgaaatttcccaaggcgaaattcgacgag
actgtggagctttctatgaagcttctcgttgatccacgtaagggggaagaaatggttcgt
ggaacggtgatgttgcctcacgggagtggaaagacggttcgtgtcttggcattcacttcc
gatgttgaagcagcgaaagctgcgggagcgacggaagcgggactggaagacatgatcgaa
aaggtccaaggaggctgggttgattttgatgtggcggtcgcgacaccggatgccatgaag
gaggttcgtaagatcgcccgtgttctcggtccaaaaggcctgatgccaaacccaaaggca
ggcacggtctcgccagatatcgataaagcgattaaggaagtgatggctggtcgagtggag
ttcaagttggataagagcgctaccttgggagtaggcgttggaaaacgatccttctcaaaa
gagcaaatcgctgaaaacgtaaacgcgattttggatgcgatcggcaaagctaggccagca
ggcttcaaaggtcggtacattcgaagtgcgagtatctccggcacgatgaccccgggcttg
aaaatagcgggatccgaatattcgaaatactaa
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