Candidatus Pelagisphaera phototrophica: GA004_16895
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Entry
GA004_16895 CDS
T09061
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02024
Quorum sensing
ppht03060
Protein export
ppht03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GA004_16895 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GA004_16895 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GA004_16895 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppht02044
]
GA004_16895 (ffh)
Enzymes [BR:
ppht01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GA004_16895 (ffh)
Secretion system [BR:
ppht02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GA004_16895 (ffh)
Eukaryotic Sec-SRP protein
GA004_16895 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
6PF2K
ResIII
nSTAND3
AAA_31
APS_kinase
ArsA_ATPase
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QXD31957
LinkDB
All DBs
Position
3828368..3829762
Genome browser
AA seq
464 aa
AA seq
DB search
MFESLTDKLSHAMRQLRGTAKLSEENMSEALKEVRAALLSADVHFKVAREFIETVKEKCV
GQEVLKSVTPSQQIIKIINDELVRLLGEGETELSTNRPLKILMVGLQGGGKTTTSAKIAK
FLKKEGYNPLLVACDIYRPAAIDQLESVGEQIGVPVFSDRSSPDVPLIGENALKQSQIEG
RDLIIFDTAGRLQIDAPLIEEIKELKRRIQPDEVILVADGAIGQEAINVAESFHEAVELT
GIAMTKLDGDARGGAALSMKQITNVPIKFAGTGEKLEDFDLFHADRMASRILGMGDVVSL
VEKAQESIDEKEAERMAGRMMAADFNFEDMLNQFSQVKKLGSMQSIMGMMPGMSGMKMDD
KAENQMKQSEAIILSMTLQERRSPNVLNASRRNRIAKGSGVKISQVNQLIKQHMQMKKMM
KKLNGGGKMKKMMKQMKAQGMDPSQMAGGDLGSGLGGFKGKLPF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaagcctaaccgacaaactgtctcacgccatgcgccaacttcgcggtacggcg
aagctgagcgaggaaaatatgtccgaagctctgaaggaggtgcgcgccgccctcctttcc
gccgacgtccacttcaaagtcgcgcgggagtttattgaaaccgttaaggaaaagtgcgtc
ggacaagaagtcctgaagtcggttactccgagccaacagatcatcaagatcatcaacgac
gagttggttagactcttaggtgagggtgaaacggagctgtcaaccaatcggcccctcaaa
atattgatggtgggtctgcaaggagggggaaagacaaccacctctgccaagatcgcgaag
tttctcaaaaaagagggctacaatcctcttttagttgcctgcgacatctatcgtcccgct
gcgatcgaccagcttgaatccgtcggtgaacagattggcgttcctgtattttcagataga
tcatcgcccgacgttcctctgattggcgaaaacgcgctaaagcagagccaaattgaagga
cgtgacctgatcattttcgataccgcaggacggctccaaattgacgccccactgatcgag
gaaatcaaggaactcaaacgacgcattcaacccgacgaagtcattctggtcgcggatgga
gcgatcggtcaggaagcaattaatgtggccgagtccttccacgaagcagtcgagctaacg
gggatcgccatgacaaaactcgatggagacgcccggggtggcgcggctctctcgatgaag
caaatcaccaacgttccgatcaaatttgcaggtaccggcgagaagctggaggacttcgat
cttttccatgccgaccggatggcttcacggattctcgggatgggcgacgtggtttcgctc
gtcgaaaaggcccaagaatcgatcgacgagaaagaggcggagagaatggccggccgcatg
atggctgccgattttaatttcgaagatatgctcaaccagttcagccaagtcaaaaaactg
ggctcaatgcagtcaattatgggaatgatgccaggtatgagcggaatgaaaatggacgac
aaagcggaaaatcagatgaagcagtccgaagcgatcattctctccatgacgctacaagaa
cgtcgctcgcctaatgtcctcaacgccagccgccgcaatcgtattgccaaaggttccgga
gtcaaaatcagccaggtcaatcagctcatcaagcagcacatgcagatgaagaagatgatg
aaaaagcttaacgggggcgggaaaatgaagaaaatgatgaagcaaatgaaagctcaaggc
atggacccttctcaaatggccggtggcgacctgggtagtgggctgggcggctttaaagga
aagcttcctttttaa
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