Candidatus Pelagisphaera phototrophica: GA004_16915
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Entry
GA004_16915 CDS
T09061
Symbol
cobA
Name
(GenBank) uroporphyrinogen-III C-methyltransferase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00860
Porphyrin metabolism
ppht01100
Metabolic pathways
ppht01110
Biosynthesis of secondary metabolites
ppht01120
Microbial metabolism in diverse environments
ppht01240
Biosynthesis of cofactors
Module
ppht_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
GA004_16915 (cobA)
Enzymes [BR:
ppht01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
GA004_16915 (cobA)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
GA004_16915 (cobA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Fe-ADH
BRCT
Motif
Other DBs
NCBI-ProteinID:
QXD31961
LinkDB
All DBs
Position
complement(3832279..3833811)
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AA seq
510 aa
AA seq
DB search
MPKGSVYLVGAGPGNPGLITVRAKELIESCDTLIYDSLVHPAVLALQKEKCEQIFVGKKS
GCHSVPQAEIQSLIVAKAREGKLVVRLKGGDPFIFGRGSEEALFLRQEGVYFEIVPGITA
AIGAGAFSGTPLTQRNSSSTLVIVTGHEDPEKPEISVDWANIPRVNSTVCVYMGISRLEL
IAASLMDAGFESDTAVACVEWATLGCQRVCRGSLGTICGDAKEFKLKSPAVIIIGENAGM
GDEISWFESQPLQGRRFVVTRSQGQASELSEKLEKLGAEVIGLPLISISRNVNEQTRDDV
FAELASYDWIVFSSPNGVRHFFDTFFEKFDDIRSLGFIRIAAVGKSTAKEISKFYVATDL
IPEEANAESLADALVATESLDSAKVLLVTGNLGRDVLLKKLEEARAIVDRFEVYRTDPTD
LSSDPAAKAFREQGADAILFTSSSGVKSFVDQAKDLVLSADAIRPKTVSIGPITSASMER
LGVPRNFQAKEASLDSLVEELVRNFGKESN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggggtcagtctatttggttggtgccggtcctggcaatcctggcttgataaca
gtaagagcaaaggagctcattgagtcctgcgacacgctcatttacgactcgcttgtacat
cccgcggtacttgccttgcaaaaggagaaatgcgaacagatttttgtgggcaaaaagtcg
ggctgtcattcagttccccaagctgagatccaatcgttgattgttgcaaaggcgagggag
gggaagcttgtggtgcggcttaaaggaggtgatccttttatttttggtcgtggcagtgag
gaagctttgtttttgcgccaagagggggtctatttcgagatcgttccaggaataactgct
gccattggggcgggagcctttagcgggactcctctgacgcagcgaaactcgagttcgacc
cttgtgattgtgacggggcacgaggacccggaaaaaccagagatctcggtggactgggcc
aacattcctcgggtgaatagtacggtctgtgtttacatgggaatttcaagactggagcta
atagcagccagtctgatggatgctggatttgagagcgatacggctgttgcctgtgttgag
tgggcgacgttgggctgccagcgtgtgtgtcgggggagtttgggcacaatttgtggtgac
gccaaggagtttaaattgaaatcacctgccgtcataattataggagagaatgctggaatg
ggagacgaaatatcatggtttgagtcacagcctctgcaaggacggcgcttcgttgtgaca
cgaagtcagggacaggcgagtgagttgagtgaaaaactggagaaactgggagcggaggtg
atcggcctgcctttgatttctatttccagaaacgtaaatgagcagactcgagacgacgtg
tttgctgaacttgccagctatgactggattgttttctcgagccccaatggcgtacggcat
tttttcgatacgttcttcgaaaaattcgacgatatacggtccttaggctttattcgtata
gcagccgttggcaagtcaacagccaaggaaatcagcaagttctacgtagccacagatctg
ataccagaggaggcgaatgcagagagcctggcagacgctctcgtggcgacggaaagtttg
gatagcgcgaaagtgctattggttacggggaatttgggtagagatgtcctattgaagaag
ttggaagaggcgagggcgatcgttgatcgatttgaagtctatcgtacggatccaacggat
ctctccagcgatccagctgcgaaagcgttcagagagcaaggagcagatgccatacttttc
actagttcatcgggcgtgaaatcttttgtggatcaagcgaaagacttggttttaagcgcc
gatgcgattcgacccaagactgtgagtattggccccatcacgagcgctagtatggagcgg
cttggagtgcctagaaatttccaggcgaaggaagccagccttgatagtctggttgaggaa
cttgtacggaacttcgggaaggaatcgaattga
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