Candidatus Pelagisphaera phototrophica: GA004_17075
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Entry
GA004_17075 CDS
T09061
Name
(GenBank) C4-dicarboxylate TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GA004_17075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_17075
Transporters [BR:
ppht02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GA004_17075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
QXD33990
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All DBs
Position
3865057..3866085
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AA seq
342 aa
AA seq
DB search
MIGCSGPGPKQETISLTVVDGYPTQSLWVREFIDYYIPEVDKRLAATGNHQIKWNQAWGG
QIVKTRNVLPGIQKGLGDIGVVTTVFHQDKVPIQAIAYVTPFVTTDPELVARTVDQIAEK
FPEMREAWEKYDQVYLTNMVVLDSYQLFSKEPINGLSDLEGLKINGAGTNLRYLQGLGSA
GVAGSLVTYFQNINTGVVDAAMLWPEAAISFKMHEVAPYMLQADMGTVNSKAITVNKRAW
NKLPAEVQQVLSETAIDYRDHVAKLAVSKGIESLRLYQDNGGKISVMSTEERDQWAKNML
NIAKEWADGLEEKGLPGHEILKFYMDTMRANGQKISRHWDRE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgattggatgctccggacctgggcctaagcaagaaaccattagtttaacggtcgtagac
ggctacccgactcagtccctttgggtgagagagtttatcgactactacattcccgaagtc
gacaagcgcttggctgccacaggaaaccaccagatcaaatggaaccaggcttggggtggg
caaatcgtcaaaacaaggaacgtacttcctgggatacaaaaaggtctaggggatattggc
gtcgtgactaccgtctttcatcaagacaaagtcccaatccaagcgattgcctatgtaacg
ccttttgtcacgaccgatcctgagctagtcgctcgaaccgtcgatcaaatcgccgagaag
tttcctgagatgagagaagcctgggaaaaatacgaccaagtgtatttgaccaacatggtg
gttctcgacagctaccagctgttttcaaaagaaccaatcaatggactatctgatttggaa
gggctgaaaatcaatggagcgggtaccaacctgaggtacttgcagggccttggttccgcg
ggagtcgcagggagcttggtgacctacttccaaaacatcaatacaggtgtcgtagatgcc
gctatgctttggcctgaagccgctatctcgtttaagatgcatgaagtcgctccttacatg
ctccaagccgacatggggaccgttaactccaaggcgatcacggttaacaagcgggcatgg
aacaaactgcccgctgaagtccagcaagtcctttccgaaacagcgattgattaccgtgac
catgtcgccaaattggcggtatccaaaggcatcgaaagccttagattgtatcaagacaac
ggaggcaaaatatccgttatgtccacagaagagcgcgaccaatgggcaaagaacatgctg
aacatcgccaaagaatgggctgacggtttagaagaaaaaggacttccgggacacgaaata
ttgaagttctacatggataccatgcgagctaatgggcaaaagatctcccgtcactgggat
cgggagtaa
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