Candidatus Pelagisphaera phototrophica: GA004_17305 Help Entry GA004_17305       CDS       T09061                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism ppht  Candidatus Pelagisphaera phototrophica Pathway ppht02020   Two-component system ppht02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ppht00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     GA004_17305 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     GA004_17305 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ppht03021]     GA004_17305 (rpoN) Transcription machinery [BR:ppht03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      GA004_17305 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_Tnp_ISL3 LacI Motif Other DBs NCBI-ProteinID:  QXD32033 LinkDB All DBs Position 3921771..3923234 Genome browser AA seq 487 aa AA seqDB search MAAQGFNQELRQKQTQSQVLAPQLRHSLKILQVAAQDLNITIQEELQTNPSLEEMPMDGV SLDDGTLNGSDGENPEQESASQNEELKFDETFEILSKIDQDWRDHLSEASSGQSFTSEDA ERRDHFFDSLVTETSLQEHLLSQASLSDISAKECEAIEYLVGSLDNNGFLNTSLSDLALF SGMSLGEMQSAHQTLKSFDPPGIGAFDLQDCLATQLELQGLRNSDAYEMVQNHLKLLTRR RIPDITRKMGINSDEVQAAIDDIALLDPAPGRRFSEDTNRSVLPDVVVERDEDKWKVTLN SDYIPRLRISPSYKEMIAKGQLSPEEREYIQEKMRSGKFLISSIEQRQQTIERIANEIVK IQVAFLEDGVAKLKPCTMTQVAETVRVHETTVSRAIANKYIQTPHGIFDMKFFFTPGYKG GGGEDISNTSVKGMIQQLVSNEEPTKPLSDQGIVALLKEKEINIARRTVAKYREELGILP SNLRRQY NT seq 1464 nt NT seq  +upstreamnt  +downstreamnt atggcagcacaaggattcaatcaagaactgagacaaaagcagacgcagtctcaagtcctt gcccctcaactgcgtcattcgcttaagattctgcaggttgccgcccaggatctcaacata acgatccaggaagagcttcaaacaaatccgtcgctggaagaaatgccgatggatggagta agcctagacgacggcacgttaaacgggtcggatggcgagaaccctgaacaggaatctgct agccagaacgaagaattgaagttcgacgagacattcgagattctgagcaagatcgaccaa gactggcgcgaccacctgtccgaggccagcagcggtcagagctttacctctgaggatgcg gagcgtcgcgatcattttttcgactccctcgtgaccgagacttcattgcaggagcacctt ctttcccaagcgtctttgtccgatatcagcgccaaggagtgcgaagcgatcgaatacctt gtcggtagcctcgacaacaacgggtttctaaacacatctctctccgatctcgccttattt tccggcatgtcgcttggcgagatgcagtctgctcaccaaacgttgaagtcattcgaccct cctggaatcggcgcattcgatctccaagactgtctggctacgcaactggaactgcagggc ctcagaaactcggatgcctacgagatggtccagaatcatcttaagcttctcacccgaaga cgtattcccgacatcactcggaaaatggggattaattccgatgaggttcaagcggctata gacgatatcgccttgcttgaccccgctcccggtcgccgcttttccgaggacaccaatcga tccgtactccccgatgtcgtcgtggaaagagatgaggacaagtggaaggtgaccctaaac agcgactacattcctcgtcttcgtatcagtccttcctacaaggaaatgatcgccaagggc cagctttcccccgaggagagagagtacattcaggagaagatgcgatccggcaaatttctc atcagctcgatcgagcaacgccagcaaacgatcgagcgaatcgcgaacgagatcgtaaaa atacaagtcgccttcctcgaggatggagtggccaagctgaaaccttgcaccatgacccag gtcgctgaaacggtgagggttcacgaaacgacggtcagccgggcgatcgccaacaagtac atccagaccccgcatgggatcttcgatatgaagttctttttcacccccggctacaaaggg ggaggcggtgaggatatctccaataccagcgtcaagggaatgatccagcaattggtgtca aacgaagaacccaccaaaccattgagcgatcaaggaatcgtcgcccttctcaaagagaag gaaatcaacatcgcgcgacgtaccgtagccaagtaccgggaagagctcggcatcctgccg agcaatctgagacggcaatactag

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