Candidatus Pelagisphaera phototrophica: GA004_17615
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Entry
GA004_17615 CDS
T09061
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00260
Glycine, serine and threonine metabolism
ppht00460
Cyanoamino acid metabolism
ppht00630
Glyoxylate and dicarboxylate metabolism
ppht00670
One carbon pool by folate
ppht00680
Methane metabolism
ppht01100
Metabolic pathways
ppht01110
Biosynthesis of secondary metabolites
ppht01120
Microbial metabolism in diverse environments
ppht01200
Carbon metabolism
ppht01230
Biosynthesis of amino acids
ppht01240
Biosynthesis of cofactors
ppht04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GA004_17615
09102 Energy metabolism
00680 Methane metabolism
GA004_17615
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GA004_17615
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GA004_17615
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GA004_17615
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GA004_17615
Enzymes [BR:
ppht01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GA004_17615
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
QXD32089
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Position
complement(3991809..3993338)
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AA seq
509 aa
AA seq
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MSNLTTTSPVSEYLSSRSPDEVNPAMLSYVANLQQVASVNAPIAASIVKELQDQRSNLKL
IASENFTTLNTQAAMGNLLTDKYAEGFAGARYYAGCDNIDAIESEACEQACRLFDAEHAY
VQPHSGADANLIAFWAILQARVGTPLIEEMGEANPSKMSREDWNKVRAAMGNQKMLGLDY
YSGGHLTHGYRFNISAQFFDAYNYSVSKETGLLDYDELEAQALEIKPLILLAGYSAYPRK
VDFRRMKEIADKVGAVLLVDMAHFSGLVAGGVFEGDYNPMPFADVVTTTTHKTLRGPRGG
VILCKKEFAEYIDKGCPLVIGGPLPHVMAAKAVAFKEANETEFKEYAQNVVNNSRAIADA
MIDEGLKICTGGTDNHLLLIDVTPFGLNGRQAEAAVRECGVTLNRNSLPFDPNGPHYTSG
LRVGSPAITSLGMGAEEMKEIASIFKLILSSTTPKILTKGKNAGQPSKVKYDISETVVEE
GRARVQSLLDRFVLYPELDVEFLISHFSL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatctgactacgacgtcacctgtctctgaatatctctcgtcccgctcgccggat
gaagtgaatcccgccatgctgagctatgttgcgaacctgcaacaagttgcctcggtaaac
gcgccgatcgccgcatcgattgtgaaagagctccaggaccaacgcagcaatctcaagctc
attgcgtccgagaattttaccacgctgaacactcaagcggccatgggcaatttgcttacg
gacaagtacgcggaaggattcgctggggctcgctactacgcgggttgcgacaacatcgat
gcgatcgagagcgaagcctgtgagcaagcctgccggctttttgatgcggagcacgcttat
gtgcagcctcactcgggggcggatgcgaacctgatcgctttttgggccatcctgcaggct
agagtcggcacacctctcatcgaggaaatgggtgaagccaacccttccaaaatgtcccga
gaggattggaacaaggtgcgcgcggcgatgggtaatcagaaaatgctcggactggattac
tactccggaggccacttgactcacggttatcgatttaacatttccgcccagttttttgat
gcctacaactattcagtcagcaaggagaccgggttgctcgactacgatgagctggaagct
caggcactggagatcaagccattgatcctgttagcgggttatagcgcctatccgagaaag
gtagatttccgtcggatgaaggaaatagctgataaggtgggagcagttctgttggttgat
atggcccacttctcaggactggttgccgggggtgttttcgagggcgactacaatccgatg
ccgtttgctgatgtagtgacaacgaccacacacaagacactccgaggccctcgtggtgga
gtgatcctttgtaaaaaggagtttgctgagtatattgataaagggtgtcctctcgtgatt
ggcggaccgctgccgcacgttatggcagccaaagcagttgcttttaaggaagcaaacgag
actgagtttaaagagtacgcgcagaacgtggtgaataattcgcgagccatcgcggacgcc
atgatcgacgaaggtctcaagatctgcacgggtggaaccgacaaccacctcttgctgatc
gacgtgactccgttcggtctcaacggacgacaggcggaagccgccgttcgtgaatgtggc
gttacgttgaaccgaaactcgttacctttcgatcccaatggcccccactacacgagtgga
ttgcgagttggttcccccgcgatcacatcattgggaatgggagccgaggagatgaaagag
atagcttcgatttttaagctcatactctcaagtactacgccaaaaatactcactaagggt
aaaaatgcgggtcagcccagcaaagtgaaatacgatatctctgaaactgtcgtagaggag
ggaagagctcgtgtgcaaagccttctagaccgattcgtattgtatccagaattggatgtc
gaattcctgataagccacttttcgctatag
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