Candidatus Pelagisphaera phototrophica: GA004_17815
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Entry
GA004_17815 CDS
T09061
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht01501
beta-Lactam resistance
ppht02010
ABC transporters
ppht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GA004_17815
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GA004_17815
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GA004_17815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_17815
Transporters [BR:
ppht02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
GA004_17815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QXD32124
LinkDB
All DBs
Position
4047261..4048859
Genome browser
AA seq
532 aa
AA seq
DB search
MTNRLFCSTLIVIHCFNPFSVATPADDAIDEGILLLGNGSEPHSLDPHINSSMNGHHVIV
SLIEGLIAPHPTDDSLPHPGMAYKWEHENNTVWTFHLRDAKWTNGEPVTAHDFVYGFKRI
LSPRLGSQYSEMLYSMKNAKEYNEGEITDFSQVGAEALDKLTLRVTLKEPVPYFYNIIKH
NSWFPVHPETVEKYGAIDDPANNWIREEYVSNGPFELKNWQMNQIIEVEKNPSYWNADQV
KLNGIKFYPIVSENTEDQMFNSGALHYSYTIPTDMIPVYQERNDPTVKIEPFLGVYYYSL
NTKVPPLDNPKVRHALSYAVNRNTIVRRITKGGQLPAGNFTPPGISGYEPESIASFNPKK
ARELITEAGFPNGEGFPKLTLLFNTLESHKAIAEAIQQMWKSILGIDVEIRNQEWKVFVN
TRHEGNFEIARNGWIGDYMYPDTFLRILQSDSGQNDAQYSNPEYDRLIAESFSETDAQKR
LDLLAEAEAIMLNDMPIIPIYHYVRTYRIDPRVKGWSPTPLDVRNFTNVYFE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccgacttttctgcagcaccttaattgttatccattgcttcaacccgttctcc
gtcgccacacctgcggacgacgcaatcgacgaaggaattctcttgctcggtaacggcagc
gagccgcacagcctcgacccgcacatcaactcgtctatgaacgggcaccatgtgattgtc
agcctgattgaaggactgatcgcgccgcatcccacagacgatagcctgccccaccctgga
atggcctacaaatgggaacatgaaaacaatacggtatggaccttccatcttagagacgcc
aaatggactaacggtgagcccgtaaccgctcatgatttcgtttatggcttcaagcgcatt
ctctcgccgcgcttaggctctcagtattcagagatgctctactcaatgaaaaacgccaaa
gagtacaacgaaggcgagattaccgatttctcgcaagtcggagcggaggctctagacaag
cttacgctgcgcgtgaccctcaaggaaccagtcccctatttctacaatatcattaagcac
aattcctggttccccgtccaccctgaaacggtcgaaaagtacggtgcaatcgatgacccc
gccaataattggatacgcgaggaatacgtaagcaatggtccattcgagctcaagaattgg
caaatgaaccagataatcgaggtcgaaaagaatccgagctactggaacgccgaccaagtg
aagcttaacggaatcaagttctaccctatcgtcagcgagaacacggaggatcaaatgttc
aacagcggggcgctgcactacagctatacgattccaaccgacatgatccccgtgtatcaa
gagcgcaatgaccccaccgttaagatcgaacccttccttggggtctattattattcgctg
aatacgaaagtgcctcctctggacaacccgaaagttagacacgcattaagctacgcggta
aacagaaacaccattgtacgcagaatcaccaaagggggacagctccctgcaggcaatttc
accccccctgggataagcgggtacgagccagaatccattgcctccttcaaccctaagaaa
gcgcgtgagctcataacggaggccggtttcccaaatggagagggattccccaaacttacc
ttgctcttcaacacattggagagccacaaggcgattgctgaggcaatccagcaaatgtgg
aagagcatcctgggaatagacgtagaaatccggaaccaggaatggaaagtcttcgttaac
acgagacatgaaggaaacttcgaaatcgcccggaatggctggatcggcgactacatgtat
cccgatactttcttgaggatccttcaatcggatagcgggcagaatgacgctcaatattcg
aaccccgaatacgatcgacttattgccgaatctttttccgaaaccgacgctcagaagcgt
cttgatctcttagctgaggccgaagcgatcatgctaaacgacatgcctattattccaata
taccactatgtgagaacctaccggatcgaccctagggtcaagggctggagtcccacgccg
ctcgacgtgcgcaatttcacgaacgtctattttgaataa
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