Phoxinus phoxinus (Eurasian minnow): 306984116
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Entry
306984116 CDS
T12064
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2 isoform 1
KO
K10755
replication factor C subunit 2/4
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx03030
DNA replication
pphx03410
Base excision repair
pphx03420
Nucleotide excision repair
pphx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
306984116 (rfc2)
03410 Base excision repair
306984116 (rfc2)
03420 Nucleotide excision repair
306984116 (rfc2)
03430 Mismatch repair
306984116 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphx03032
]
306984116 (rfc2)
03036 Chromosome and associated proteins [BR:
pphx03036
]
306984116 (rfc2)
03400 DNA repair and recombination proteins [BR:
pphx03400
]
306984116 (rfc2)
DNA replication proteins [BR:
pphx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
306984116 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
306984116 (rfc2)
Chromosome and associated proteins [BR:
pphx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
306984116 (rfc2)
DNA repair and recombination proteins [BR:
pphx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
306984116 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
306984116 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_24
MipZ
AAA_18
DNAX_ATPase_lid
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
MeaB
SLFN-g3_helicase
NTPase_1
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
306984116
NCBI-ProteinID:
XP_079441286
LinkDB
All DBs
Position
17:17603193..17606919
Genome browser
AA seq
353 aa
AA seq
DB search
MDVEMKETDSEQSQVDGQPKKDDTAPKTSTTAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDDQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKVIEQLWSLGYSPEDIIGNIFR
VCKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgagatgaaagagacagacagtgaacaaagtcaagtcgacggacagcctaaa
aaggatgatactgcaccgaaaacatcaactactgcttatgaactaccatgggttgaaaaa
tacagacctctgaagttgaatgaaatagttggaaatgaggaaactgtcagcagactggag
gtgtttgcaagagaaggaaatgtgcccaacatcatcattgctggtcctcctggcactgga
aaaactaccagcattttgtgtttggctagagctcttcttggcccggccatgaaagatgct
gttcttgagctgaatgcctcaaatgaccgtggtattgatgttgtaagaaacaagattaaa
atgtttgcccagcaaaaggtcacactccctaaaggtcgccacaagatcataatcttggat
gaggctgacagcatgaccgatggagctcagcaggctctcagaagaaccatggagatttac
tctaaaaccacacgctttgctctggcatgtaatgcatcagataagatcatagagcccatc
cagtcccgctgcgctgttctgcgttacagcaaactccgagacgaccagatcatgatgcgt
ctcacggaggtggtagagaaggagaacttgcatgtcaccaacgacggccttgaggccatt
atcttcaccgctcaaggggacatgagacaggctctgaataacttgcagtcaacaaattct
ggatttggttacatcaacagtgaaaatgtgttcaaggtgtgtgacgagccacatccactg
ctggttaaaagcatgctagaacactgcgtcaacgccaacattgatgaagcctacaaggtt
attgagcagctttggtcactaggatactcaccggaggacatcatcggaaacatctttaga
gtgtgtaagacctttcagatggcagaatatttgaagctggaatatattaaggaaattggc
tacacgcatatgaaagtggcagaaggggtgaactctctgttgcagatggctggtctgttg
ggtcgactgtgcagtaagacggctgcacctgatgcaagctga
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