Phoxinus phoxinus (Eurasian minnow): 306986930
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Entry
306986930 CDS
T12064
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform 1
KO
K14296
nuclear pore complex protein Nup153
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx03013
Nucleocytoplasmic transport
pphx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
306986930 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
306986930 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphx03019
]
306986930 (nup153)
Messenger RNA biogenesis [BR:
pphx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
306986930 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
306986930
NCBI-ProteinID:
XP_079446867
LinkDB
All DBs
Position
19:1898235..1929523
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AA seq
1446 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKGKQQQPGLITRVTDTVKSIVPSWLQKYFKNGEVAEGE
VAAVGIEQNNVAPPPNGNDEAVPLPDGRDSPEPSTSNTEPSTSRASLNFQEALSRPPLNR
THLHFPSLDGSPGLGGASALFSQPSTSTAPYSGSPFAVTSNFSLVKEIKDSSSQHEDDNI
STTSGFSSRASEKDVPTSKTVPLLWSPESERTHSGSQPAHSSLKRPAFNLSVFGTSSSSV
LNSSVLNSSPLGDSPFYPGKTTYGGAAAMRTARSRPATPYQPPVRRHIKAKPAGAQPCGV
TSATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDISNYQSKRKRLEPSVPP
VQKLVVPAAAAVSGNRSMSFRPSLTPGGGNRGLDKSNRETPVRQSPPISDLSQAPSTSTS
SMSYPLSSTPAPSSAASGGGKMKRERAIRPSSKRPDDELAEDPDLPPASLPSNFTLPTFN
FSSPPPTSSFTSATTPLATVSEEPPANKEPVAPSTPPSVPFTFSSPIVKATAASPPTFSP
SAGFTFSAPTLKTGPSYSNGKIVPTVVPVKSVASEEKEFEGPFKPAKVLKQGSVLDILKG
PGFASPSQNSADKPSLSSASFSGFGDKFRPPAGSWSCDTCLLQNKSSEKKCVACFASQPN
TDSASKSDSKPAEAPASISSLFAPPAGSWECDTCLVNNKPEVIKCVACETAKPGTGVKSR
LTLPALSETSSSLSTTTTTVASSKATGLLGFGDKFKKPEGAWDCDVCMVQNKAQDVKCVS
CMSSKPGAVAAVVSTPVSAPTTSAASLLGFGDKFKKPEGSWECEVCCVQNKAADQQCVAC
QSTKPGAKIESKGFSSSFGTQSNSTDSGSSSGFKFGTGSTDSTSAGLKFGGAFSDSSTAG
GFQFGIGTSDSTSKSEGFKFGGAFSDASSGGVKLGSASSESTATKESLTKGFNFSGSMND
DVIEKKTKSQDSSTGFKFGGGNGITFSSQASGSENSAFVFGAKPSEKESSNSSFSFSGPQ
SKAEKEDAPAFSENASATTTSTTTAAAANAIPVFGKSLVAQSSASKFVEQATKEQTLVAP
NFTFGKPEEKKDTSAPSGAFLFGASKEAEKPTANLGFSFSEPDPPKDFPKPTLTFGKTAE
STEPPKPSFGFGQSITDTSAPTPNFGFMANSSSTPASSSSTPSLFITPTTSSLAPTPAPS
SAFVFGQSSSSELTMAKTFVFGQQDSQTPAPAAPSAAPAPAQPFQFGSGSNSSGPSFNFG
AVASSTPASAAPAPSANPSPFVFSSAAPSSGFGTGQAPIFGQNASQPSAPAFGSSAPSFS
ATASPASAFGAKSNSAPVFGQQANATPTFGSTAAATGQGGFQFGSTGGFGASGSNSNVFG
FGGAAAPATPAASPAMPALNPTGGGFSFGQTPAFNIGSGKSPFTPAPPAQNSIAGRKIKT
AVRRRK
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagatatcacatcgcttcaaaaccg
tatgccaaaggcaaacagcagcagcctggcctgatcactcgagtgacggatacagtgaag
agcatagtcccctcctggctgcagaaatacttcaaaaatggagaagttgcggagggggaa
gtcgctgctgtcgggattgagcagaacaacgtggctcctccacccaatggcaacgacgaa
gccgtcccactccctgatggacgagactctccagagccgagcacaagtaacacagaacca
tctacaagcagagcatcgctgaacttccaggaggctctttcgagacccccgctcaatcgg
acccacctgcacttcccgtccctggacggctctccaggattaggtggagcgagtgctctc
ttctcccagccctccacatctacagcaccctattcagggagccctttcgctgtaacctcc
aacttctccctggtaaaagagattaaggactccagctcccagcatgaggatgacaacatc
tcgactaccagcggcttttcatcacgtgcgtctgaaaaagatgtgcccacgtcaaagact
gtgccgctcctctggtccccagagtctgaacgcacccactctggatcgcagccggcccat
tctagcctcaagagaccagccttcaacctgtcagtctttggcacttcctcatcatcagtg
ttgaacagctcagtgctgaactccagtccgttgggggattcgcccttctacccagggaag
accacatatggaggagctgctgcgatgaggaccgctcgctctcgcccggctactccttac
cagcctcccgttaggaggcacataaaggcaaagccggctggagctcaaccctgtggagtg
accagcgccacagcgagacgcatcttacagtccttggagcgcatgtccagtcctcttgct
gatgcaaaaagaattccgtctacggtttcatcgcctctatcagcttccttgaatcacaca
gacctggacatttcaaattaccagtcaaaaaggaaaaggctggagccgtcggtccctcct
gtacagaagctggttgttcctgcagctgctgcggtgtccggtaaccggtcgatgtccttc
agaccgtcactcaccccaggtggagggaaccgagggctggacaaaagcaacagggagact
ccggttagacaatcccctccaatttcagatctctcccaggctccatctaccagtacaagc
agtatgtcctacccgttgtccagcaccccagcacccagcagcgctgcttcaggagggggc
aaaatgaagagggaaagagcgattagaccttcatccaaacggcctgacgatgagcttgct
gaggatccagacctgccgcctgcttctcttcccagcaatttcactttgcccacatttaat
ttctcatctcctccccctacctcctcgttcacctccgccacaacaccacttgcaaccgtt
tctgaggaaccgccagcaaataaggagccagtggcaccatccacaccaccatcagtccca
ttcacattctcttcacctatcgtaaaggcaacagcagccagtcctccaactttctctcca
tcagctggattcaccttcagtgcacctaccttgaaaacaggcccttcttactccaatggg
aaaattgttccaacagtagtaccagtcaaatcagtggccagtgaggaaaaagagtttgaa
ggacccttcaaacctgcaaaggtcttaaaacagggcagtgtattggatatacttaaggga
cctgggtttgcatccccctctcagaactctgctgataaaccttcattatcatctgctagt
ttttctggttttggtgacaagtttaggccacctgcaggttcatggagctgtgacacttgc
ctattgcaaaacaagtcctcggaaaaaaagtgtgttgcttgtttcgcatcacaacccaac
actgactctgcctctaaatcggacagtaaacccgcagaagctcctgcaagcattagttct
ctctttgctcctccagctggtagctgggaatgtgacacatgtttggtcaataacaaaccg
gaagtaattaaatgtgtagcttgtgagacagccaaacccgggactggagtgaaatccaga
ctgactctaccggctctttccgagacctcatcctctctctctacgaccacaacgactgtg
gcttcatctaaagcaactggactgttaggatttggggacaaatttaagaagccagagggg
gcttgggattgtgacgtgtgcatggttcagaacaaggcacaggatgtcaaatgcgtatcc
tgtatgagctctaaaccaggagctgtagccgctgtggtctcgactccagtctctgcacct
acaacctctgctgcgtctttgttaggattcggggacaagttcaagaaacctgaggggagc
tgggagtgtgaggtgtgctgtgttcaaaataaggcagcggaccagcagtgtgtggcctgc
cagtcaacaaaacccggagcaaaaatagagtccaaaggttttagttcatcttttggcact
cagtccaacagtacggactctggaagttcatctggttttaagtttggtaccggctctacg
gactcgacctctgctggattaaagttcggaggcgctttctcagattcttccaccgcggga
ggatttcaatttggaatcgggacttccgactcaacctcaaaatcagaaggcttcaaattt
gggggcgcgttctcggatgcaagttctggcggggtcaaactcggtagtgcctcgtcagaa
tccacagcgacaaaggagagcttaacaaagggctttaattttagtggatccatgaatgat
gacgtaatcgaaaaaaagactaaatcgcaggattctagtacgggatttaaatttggtggt
ggaaatggaatcactttcagctctcaagcttctggctctgaaaactctgcatttgtattt
ggagctaaacccagtgagaaggaaagctcaaattcatcctttagtttctctgggccccag
tccaaggctgagaaagaagatgctcctgctttctcagaaaacgcgtcagccaccacaacg
tcgacgacgacagcagcagcagcgaacgccatccctgtttttggcaagtctttagttgct
caatcttctgcctcgaagtttgtggagcaagcaacgaaagagcaaacgctggtggcgcct
aacttcacctttggaaaaccagaagagaaaaaggacacctctgcaccctcaggtgcgttc
ttgttcggtgcttccaaggaagctgagaaaccaacagcaaacttgggcttctctttcagc
gagccagacccgccgaaagatttccccaagcctacgcttacgtttgggaaaactgcagag
tcaacagaacccccaaagccatcatttggttttggacagagtataaccgacacatctgct
ccaacgcccaattttggcttcatggctaactcctcgagcaccccagcttcatccagctcc
acccccagcctcttcatcactcccactacctcttccctggctcccacccctgctccctca
agcgcctttgtattcggccagagttcctcctctgaacttaccatggcaaagactttcgtg
ttcggacagcaggacagccagaccccggcacctgcggctccttctgctgcacctgcacca
gcacaacctttccaatttggctcgggctcaaactcatctggcccttctttcaattttggt
gctgttgcgtcctccaccccagcctctgccgctccagctccgtctgccaacccttccccg
tttgtctttagctctgccgctccttcatctggctttggcactggacaggcgccaatcttc
ggacaaaacgcgtcccaacccagtgctcctgcgttcgggtcatcggcaccttcgttctcg
gccaccgcttccccagcatctgcattcggagccaagtccaattctgcccctgtattcggt
cagcaagccaatgctacgcctacgtttggatcgactgctgccgccacgggccaaggaggg
ttccagtttggcagcactggtgggtttggagcgtcggggagcaacagtaatgtgtttggt
ttcgggggggcagcagctccagcaactcctgccgccagtccggcgatgccggcgctaaac
cccaccggcggaggcttcagcttcggccagacccctgcttttaacattgggtcaggaaag
agtcctttcacaccagcaccacctgcgcagaattcaatcgctggacgcaagatcaaaacg
gctgttcgccgcaggaagtaa
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