Phoxinus phoxinus (Eurasian minnow): 306989543
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Entry
306989543 CDS
T12064
Symbol
sox8a
Name
(RefSeq) transcription factor SOX-8a
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphx03000
]
306989543 (sox8a)
Transcription factors [BR:
pphx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
306989543 (sox8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
306989543
NCBI-ProteinID:
XP_079451492
LinkDB
All DBs
Position
21:30479421..30491131
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AA seq
382 aa
AA seq
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MSKEPDKTSSGTESSFIGDPDSDSPSSPSVSDEQVARTGTGERADSEEDARFPPCIRDAV
SQVLKGYDWSLVPMPMQGLRSLKDKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSK
TLGKLWRLLSESEKRPFVEEAERLRVQHKKDYPDYKYQPRRRKSLKPGQGELDPGAEKIQ
HPNDHMFKMEAGVRGMHSHAVQAHGPPTPPTTPKSDQHHSVKRVPENTRQNIDFSNLDIS
ELSSDVIGGMGPFDVREFDQYLPLTGPSESLSYHHHGTGPAWNKPSASPSTSSHRPLIKT
EQLSPSHYGESHGSPPQSDCPDMQNSAYFTTFSGYPAGIYQYPYSHFSRRPYVTPVLNSL
SSPSHSPGANWEQPVYTTLTRP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggagccggataaaactagttctgggaccgaaagctcttttattggagatccg
gactctgattcaccgtcttctccatccgtgtccgatgagcaagttgcgcgaaccggcacc
ggcgagcgcgcggacagcgaggaggacgcgcgtttcccaccgtgtattcgagatgccgtg
tcgcaggtcctcaaaggctacgactggtccctggtgccgatgccgatgcagggactcagg
tctctgaaggacaagccgcacgtgaagagacccatgaacgcgtttatggtgtgggcgcag
gcggcgcgcaggaagctcgcggatcaatacccgcatctgcacaacgccgagctcagcaag
accctgggcaagctatggaggctgctctccgagagcgagaagaggccgtttgtggaggag
gccgagagactgcgcgtccagcacaagaaagactatccggattacaagtaccagcctcgg
agacgcaagagcctgaagccgggtcagggggaactggacccgggagctgagaagatccag
catcccaacgatcacatgttcaagatggaggcgggagtgagagggatgcacagtcatgcg
gttcaggcacacgggcctccgacgcctccgaccaccccgaagtcggaccagcaccacagc
gtgaagcgtgtgccggagaacacccggcagaacatcgacttcagcaatctggacatctcc
gagctcagcagcgacgtcatcggcggcatgggcccgttcgacgtgcgcgagttcgaccag
tacctgccgctgaccggcccgtccgagagcctgtcctatcaccatcacggcaccggcccg
gcgtggaacaagccgtccgcgtcaccgtccacatcttcacacagaccgctcattaaaact
gaacaattgagtccttctcattacggagagtctcacgggtcgccgccccagtcggactgt
cccgacatgcagaactcggcgtacttcaccacattctccgggtatcccgctggcatttac
caatatccgtactcccatttctccagacggccgtatgtgactccggtcctcaacagtttg
tccagtccgtctcatagtcccggtgcaaactgggagcaaccggtgtacacgactttaacg
cggccgtga
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