Phoxinus phoxinus (Eurasian minnow): 306990153
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Entry
306990153 CDS
T12064
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform 1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
pphx
Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx03320
PPAR signaling pathway
pphx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
306990153 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
306990153 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphx03000
]
306990153 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pphx03310
]
306990153 (pparg)
Transcription factors [BR:
pphx03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
306990153 (pparg)
Nuclear receptors [BR:
pphx03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
306990153 (pparg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
306990153
NCBI-ProteinID:
XP_079452703
LinkDB
All DBs
Position
22:complement(959611..1010578)
Genome browser
AA seq
525 aa
AA seq
DB search
MLHRRFNSRNSSFASDMVDTQTFAWPVGFGLSALELEELDDSSHSLDMKPFSTLDYTSIS
GIEYEPSPQSEPPHMMDLTHMYSYRTQENFRTQENIYRSHESSFTAEESGYRAHQSQNLI
KLEPESPPQFAESSVPFSKAHEDPSASALNIECRVCGDKASGFHYGVHACEGCKGFFRRT
IRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLMVGMSHNAIRFGRMPQAEKEKLLAEFS
SDVDHMHPESADLRALARLLYESYLKYFPLTKAKARAILSGKTSDNAPFVIHDMKSLMEG
EHMINSRQMPMPEQRRSDMGVIHEVELRFFHSCQSRSAEAVSEVTEFAKSIPGFVNLDLN
DQVTLLKYGVIEVLIIMMAPLMNKDGTLISYGQIFMTREFVKSLRKPFCEMMEPKFEFSV
KFNMLELDDSDMALFLAVIILSGDRPGLLNVKPIEDLQETVLHALELQLKTNHPDSLQLF
AKVLQKMTDLRQLVTDHVQLITLMKETEVDWCLHPLLQEIIRDLY
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacagacgcttcaacagcagaaactcgtccttcgcttcggatatggtggacacg
cagacgttcgcctggcccgtgggattcggcctgagcgctctggagctggaggaactcgac
gacagctcgcactcgctggacatgaagccgttctccacgctggactacaccagcatctcc
ggcatcgagtacgagccgagtccgcagagcgagccgccacacatgatggatctcacacac
atgtacagttacaggactcaggagaacttcaggactcaggagaacatctacagatctcac
gagagcagcttcaccgcggaggagagcggatacagagcgcaccagtctcagaacctgatc
aagctcgagcccgagtctcctcctcagtttgccgagagcagcgtgccgttctccaaagct
cacgaagacccgtcggcctcggcgctgaacatcgagtgccgtgtgtgtggagacaaggcc
tcggggttccactacggggttcacgcctgcgaggggtgcaagggattcttccgcaggacg
atccggctgaagctggtgtacgatcactgcgacctgcactgccgcatccacaagaagagc
cgcaacaagtgccagtactgccgcttccagaagtgcctgatggtgggcatgtctcacaac
gccatccgcttcggccgcatgcctcaggcggagaaggagaagctgttggccgagttctcg
agtgacgtggaccacatgcacccggagtctgcggatctccgagcgctggccagactcctg
tacgagtcctatctcaagtacttccccctgaccaaagccaaggccagagccattctctca
gggaagaccagcgacaacgcccctttcgtgatccacgacatgaagtccctgatggaaggc
gagcacatgatcaactcccggcagatgccgatgccggagcagcggagatccgacatggga
gtcattcacgaagtggagctgcgcttcttccacagctgccagtccagatcggccgaagcc
gtcagcgaagtcaccgagttcgccaagagcatcccgggcttcgtgaacctggacctgaac
gaccaggtgacgctgctgaagtacggcgtgatcgaggtgctcatcatcatgatggcgccg
ctcatgaacaaggacggcacgctcatctcctacggccagatcttcatgacccgcgagttc
gtcaagagcttgcgcaaacccttctgcgagatgatggagcccaagttcgagttctccgtc
aagttcaacatgctggagctggacgacagcgacatggcgctgttcctcgccgtcatcatc
ctgagcggagaccgacccggcctgctgaacgtcaagcccatcgaggacctgcaggagacg
gttctccacgctctggagctgcagctgaagaccaaccaccccgactccctgcagctgttc
gctaaagtcctgcagaagatgacggacctgcggcagctggtgaccgaccacgtgcagctc
atcactctcatgaaggagaccgaggtggactggtgccttcacccgctcctgcaggagatc
atcagggacctgtactag
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