Phoxinus phoxinus (Eurasian minnow): 306990575 Help Entry 306990575         CDS       T12064                                  Symbol col2a1b Name (RefSeq) collagen, type II, alpha 1b   KO K19719   collagen type II alpha Organism pphx  Phoxinus phoxinus (Eurasian minnow) Pathway pphx04510   Focal adhesion pphx04512   ECM-receptor interaction pphx04518   Integrin signaling Brite KEGG Orthology (KO) [BR:pphx00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     306990575 (col2a1b)    04518 Integrin signaling     306990575 (col2a1b)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     306990575 (col2a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pphx00536]     306990575 (col2a1b) Glycosaminoglycan binding proteins [BR:pphx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    306990575 (col2a1b) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  306990575 NCBI-ProteinID:  XP_079453675 LinkDB All DBs Position 22:2180702..2259037 Genome browser AA seq 1490 aa AA seqDB search MILSADSRTLLLSVATLVAFLAVVKCQDENDQDPGSCTQDGQSYSDKDVWKPEPCRICVC DTGSVLCDDIICEELRDCSKPEIPFGECCPVCAADQPSSPGVPGAKGQKGEPGDITDVVG PRGPGGPMGPPGEQGPRGDRGEQGEKGSPGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGG NFASQMAGGFDDKAGGAQMGVMQGPMGPMGPRGPPGPNGSPGPQGFQGNHGEAGEPGSSG PMGPRGPPGPSGKPGDDGEPGKPGKGGERGPLGPQGARGFPGTPGLPGIKGHRGYSGLDG AKGESGAVGSKGESGSPGESGAPGPMGPRGLPGERGRPGPSGAAGARGNDGLSGGAGPPG PVGPAGASGFPGSPGSKGEAGPTGARGPEGAQGPRGESGIPGSPGPSGISGNPGTDGITG AKGSGGAPGIAGATGFPGPRGPPGPQGATGPLGPKGTSGDSGLAGFKGEAGPKGEIGSAG LQGSIGPAGEEGKRGPRGEPGAAGPVGPHGERGTPGNRGFPGQDGLAGPKGAPGERGSAG VSGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKAGPSGAAGEDGRPGPPGPQGVRG QPGVMGFPGPKGGNGEAGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQG QPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGATGPRGERGFPGERGGAGPQGLQG PRGLPGTPGTDGPKGGVGPAGTAGAQGPPGLQGMPGERGTSGIPGPKGDRGDNGEKGPEG APGKDGARGLTGPIGPTGPGGPNGEKGESGPMGPSGAAGTRGVPGDRGETGPHGPAGFAG PPGADGQPGLKGDQGEGGQKGDAGAPGPQGPSGSPGPQGPTGVSGPKGARGAQGPPGATG FPGAAGRVGPPGPNGNPGPSGPAGPPGKDGPKGVRGDGGPPGRPGDAGLRGSAGPAGEKG DPGEDGPHGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRG PPGPVGSPGLTGAAGEPGREGNPGSDGPPGRDGSAGIKGDRGDTGPAGASGAPGGSGAPG PVGPTGKQGDRGEAGPKGPSGPSGPAGARGMPGPQGPRGDKGEGGDSGDRGQKGHRGFTG LQGLPGPPGQPGDQGASGPSGPGGARGPPGPVGPAGKDGSNGLPGPIGPPGPRGRSGETG PSGPPGNPGPPGLPGPPGPGIDMSAFAGLSHHEKGPDPLRYMRADQAAEGNHQHDAEVDA TLKSLNNQVEDIRSPDGTKKSPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAIKVFCNM ETGETCVYPKPTNIPRKNWWTSKGSERKHVWFGEAMNGGFHFGYGDDNLAANTASIQMTF LRLLSTEASQNLTYHCKNSIAYMDEATGNLKKALLLQGSNDVEIRAEGNSRFTYSVLEDG CKKHTGQWSKTVIEYKSQKTSRLPIVDIAPMDIGGANQEFGVDVGAVCFL NT seq 4473 nt NT seq  +upstreamnt  +downstreamnt atgatcctgtcggcggattcaaggactttactgctatctgtggcaacactagtcgcattt ttggccgttgtcaaatgccaagacgagaatgaccaagatccaggcagctgcacgcaggac ggacagtcatatagtgacaaggacgtgtggaaacccgagccatgtcgcatctgcgtctgc gacaccggctcggtcctgtgcgacgatatcatctgcgaggagctgcgagactgctccaaa cccgagatcccgttcggggagtgttgtccagtctgtgccgctgaccagccctcctcccct ggcgtgccaggtgcgaagggacaaaaaggagaaccaggagacataacagatgttgtggga ccgaggggaccaggcgggccgatgggaccaccaggagaacaaggacctcgtggagaccga ggagagcagggcgagaagggaagtccaggtccccgtggccgagacggtgagccgggaacg ccgggaaaccccggccctccgggaccaccgggccccaacggacccccaggcctcggcgga aacttcgcgtctcagatggccggtgggtttgatgataaagcaggaggagctcagatggga gtgatgcaaggaccaatgggtccgatgggtccgcgaggaccaccaggccccaacggatct cccggtccacaaggatttcaaggcaaccacggagaagccggagagcccggatcatcgggc ccaatgggtccccgtggccctcccggtccctcaggaaaaccaggagatgacggcgaacct gggaaacctgggaaaggtggagaacgcggacctctcggacctcagggagctcgtggattc ccgggaacaccaggtctacctggaatcaagggacacagaggatattccggtctcgacggg gctaaaggagagtctggagctgttggatcaaaaggcgagtccggctctcctggagaaagt ggcgctcctggaccgatgggtccccgtggtttgcctggtgaaagagggcgtccaggaccg tctggagccgctggtgctcgtgggaatgatggtttgtccggcggtgctggtcctcctggt ccagtcggtccggctggagcttctggtttcccaggatcccccgggtctaagggtgaagca ggacctaccggagcccgcggacccgaaggagctcaaggaccccgtggagagtctggcatc cctggatctccaggaccctcgggaatctctggtaaccctggcactgacggcatcaccgga gctaaaggatcggggggtgctcccggtattgctggcgctactggtttcccgggccctcgt ggccctcctggacctcagggagcgacgggtcctctgggacccaagggaacgtctggggat tcgggcctcgcagggttcaagggtgaggctgggccgaaaggagaaattggcagcgctggt cttcaggggtccattggccccgccggagaggaaggcaagcgaggacccagaggagagcct ggtgccgctggacccgtcggcccgcacggagagagaggtactcctggtaatcgaggtttt cctggacaagatggtctggctggtccaaagggcgctccgggcgagcgtggatctgcgggt gtatcggggcccaagggagccagcggagacccaggacggccgggagaaccgggtcttccc ggtgcacggggtctgacgggacgtccgggcgatgccggtccacagggcaaagccggtcca tctggcgctgcgggtgaagacggccggccgggacccccggggcctcagggtgttcgtgga cagccgggagtgatgggattccctggacccaagggtggcaatggtgaggctgggaaggcc ggagagaagggactcgctggagctccgggtttgcgtggtctgcccgggaaagatggagag acgggcgctgctggaccccctggacctgctggtcctgcaggagagagaggagagcagggt caaccaggaccatcgggcttccagggtctgcccggaccccccggtccccctggtgaagga ggcaaacccggtgatcagggtgttcccggagaagctggagccgcaggggccactggaccc cggggtgagcgtggtttcccaggagagagaggaggtgcggggccgcagggcctccagggg ccacgaggtctaccaggaactccaggaaccgacggacccaagggtggcgtcggccccgca ggaactgctggagctcaggggcctccgggattacaggggatgcctggagagagagggacc tctgggattcctggaccaaagggggaccgaggtgataatggtgagaaaggacctgaagga gctcctgggaaagacggcgcaagaggtttaacgggtccaatcggtcctacgggtcctggg ggacccaacggtgaaaagggagaatccggacccatgggaccgtctggagctgcggggacg cgcggtgttcctggggacagaggagagaccggtcctcatggtcctgctggttttgctggt ccacctggtgcagatggacagcctgggcttaaaggagatcagggtgaaggtggacagaag ggtgacgctggtgcgccgggccctcaggggccttctggatctccaggtcctcagggccca actggtgtgtctggaccgaaaggggctcgtggggctcaaggacctcctggtgccaccggt ttccctggagccgcaggtagagtcggacctcctggacccaatggtaacccgggtccctct ggtccggctggtcctcctggtaaagacggtccgaagggtgttcgtggagacggtggtcct cctggaagacccggagacgctgggttacgtggatcggctggtcctgctggcgagaaggga gatcctggagaagatgggcctcacggtccggacgggccgtcgggtcctcagggtttggct ggtcagcgtgggattgttgggctcccaggacagcgtggagagagaggcttccctggcctt cctggaccctccggtgagcctgggaaacaaggagctcctggtggatctggagaccgtggg ccgcctggacctgtgggatcaccgggactgacaggagccgctggagaacccgggagagag ggcaaccctgggtctgatggtcctcctggccgagatggttctgcagggataaagggtgac cgaggggacacgggtccagctggtgcttctggtgctccgggcggttctggtgctcctggt ccagtcggacccactgggaaacagggagaccgaggagaggctggacctaaaggaccttct ggaccttcggggcccgctggagctcggggaatgcctgggcctcaagggccgcgtggagat aagggagaaggtggagattcaggtgacagaggacagaaaggacacagaggtttcaccggt cttcaaggtctgcctggacctcctggtcaacctggtgaccaaggtgcttctggaccttct ggacccggtggagcaagaggaccgccaggccctgttggtccagctggaaaagatggatca aatggtttgcctggacctatcggcccccccggacctcgtgggcgttctggagagactggg ccgtccggcccgcctggaaaccctggaccccccggtcttcctggccccccgggacctggc atcgacatgtctgcgtttgctggtctgtctcaccatgaaaagggtcctgatcccttgagg tacatgagggcagaccaggccgccgaaggcaaccatcagcacgatgccgaggtggacgcc actctgaaatccctgaacaaccaggtcgaggacatccgtagcccggacgggactaaaaag agcccggcccggacctgcagagacctgaaactctgccacccagactggaagagcggtgag tactggattgatcctaaccagggctgcaccgttgatgctatcaaggtgttctgcaacatg gagaccggggagacttgcgtctatccaaaacccaccaacatcccacgcaagaactggtgg acttccaagggttcagaacgcaaacacgtttggtttggagaagccatgaatggtggattc cattttggctatggagacgacaatctggcagcgaatacggcgagtattcagatgacgttc ctgagactgctgtccaccgaggcctcgcagaacctcacataccactgcaagaacagcatt gcctatatggacgaggccactggaaacctgaagaaagctcttctgctccagggatccaat gatgtggaaatccgagccgagggcaacagtcgcttcacatacagtgttcttgaggatggt tgcaagaaacacacaggacagtggagcaagacggtcatcgagtacaaatcacagaagact tcacgcctgcccattgtggacatcgcacctatggacattggaggagcaaatcaggagttt ggagtggacgtgggcgccgtgtgtttcttgtag

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