Phoxinus phoxinus (Eurasian minnow): 306992596
Help
Entry
306992596 CDS
T12064
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx03030
DNA replication
pphx03410
Base excision repair
pphx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
306992596 (fen1)
03410 Base excision repair
306992596 (fen1)
03450 Non-homologous end-joining
306992596 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphx03032
]
306992596 (fen1)
03400 DNA repair and recombination proteins [BR:
pphx03400
]
306992596 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphx04147
]
306992596 (fen1)
DNA replication proteins [BR:
pphx03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
306992596 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
306992596 (fen1)
DNA repair and recombination proteins [BR:
pphx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
306992596 (fen1)
Exosome [BR:
pphx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
306992596 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
BrxL_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
306992596
NCBI-ProteinID:
XP_079457825
LinkDB
All DBs
Position
24:complement(14850600..14868497)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADHAPSAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLESGIKPVYVFDGKPPQMKSGELAKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKSGKVYATATEDM
DGLTFGTTVLLRHLTSSEAKKLPIQEFHFSRILQDMGLTHQQFIDLCILLGCDYCGTIRG
IGPKRAIDLIKQHGSIEEILDNIDPNKHPAPEDWLYKEARGLFLEPEVVDGPSVDLKWNE
PDEEKLIQFMCAEKQFSEDRIRNGCKKIMKSRQVSTQGRLDTFFTVTGSISSKRKEPEIK
GSAKKKQKTSATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacggtcttgcaaagctcattgcagatcacgcgccttcagccatcaaggag
caagacatcaaaaactactttggaaggaagattgctattgatgcgtccatgtgcatctac
cagtttttgatcgctgtcagacaggacggaaatgttttgcaaaatgaagatggagagacc
actagccacctcatgggcatgttctacaggaccatccgaatgctggagagcggcatcaag
ccggtttatgtgtttgatgggaagccccctcagatgaaatcaggagagctggcgaagaga
ggcgagagacgagcagaggctgagaaacttctagctcaggcacaggaagcaggtgaacag
gagaacattgacaagttcagtaagcgactagtgaaagtcaccaaacaacacaatgatgaa
tgcaagaagttacttactctaatgggagtcccttacattgaggctccatgtgaggctgag
gcgacctgtgctgctctggtgaaatcagggaaggtttatgccaccgcaacagaagatatg
gacggtttgacatttggaacaacggtcctgttgaggcatctaacatccagtgaagcaaaa
aagctccctatccaagagtttcatttcagtcgtattctacaggatatgggtctgacacat
caacagttcattgacctgtgtatcctactgggctgtgactactgtggcactataagagga
atcggacccaagagggccattgaccttattaaacagcacggctctattgaagagatcctt
gacaatattgacccaaataagcacccagctccagaggactggctgtataaagaggcccgg
ggtctgttcttggagcctgaggtcgtggacggcccatctgtcgatctgaaatggaacgaa
cctgacgaggagaaactcattcagttcatgtgtgctgagaaacagttcagtgaggatcgt
atccgcaacggctgtaagaagatcatgaagagcagacaagtgagcacccagggccggctg
gacacgttctttactgtaaccgggtcaatctcttctaagcgtaaggagcctgaaataaaa
ggatctgccaagaagaaacagaaaacaagtgctacaccgggcaaatttaagaagggcaaa
tga
DBGET
integrated database retrieval system