Phoxinus phoxinus (Eurasian minnow): 306993440
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Entry
306993440 CDS
T12064
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform 1
KO
K06245
laminin, beta 4
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx04510
Focal adhesion
pphx04512
ECM-receptor interaction
pphx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
306993440 (lamb4)
04518 Integrin signaling
306993440 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
306993440 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMB1
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
Cor1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
306993440
NCBI-ProteinID:
XP_079459335
LinkDB
All DBs
Position
25:21551836..21576397
Genome browser
AA seq
1827 aa
AA seq
DB search
MQIRLETSAFLLLLIAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLYRPQNYC
ILGYLENERKCFTCDSSSPYNLHHNPNSHRIENIITTFRPERKMRWWQSENGVHEVSIQL
DLESMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSFPGVSEEPADSI
DDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDSTIQELITLTNLRVNFTRLITLGD
TLLTRRRRNPQEKYYYALYEMVVRGSCFCNGHASQCVPVDGTRGDTFSEPGMVHGRCVCQ
HNTVGYNCELCQDFYHDAPWRPGGKTDSDVCRRCNCHGHSEKCHFDLARYLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDHNACISCECDPDGSVDRGVCDPVTGQCVCK
QNVEGERCDRCKFGFYGFNRDDPSGCQLCRCNFMGTIRTDNPCDQTTGRCICENFAYGPE
CDQCLPGYWGLGNTVYGCLPCDCDVGGALRTECSSVDGQCECRPNMVGHKCSDPAPGYFL
APLDFYIYEAENAVPLAANSPFIQAPTVYLPEQIPDRPAKLPLCPFGPKPSPIPNKEPEP
QTVKPSSTPYNPHVTLPICEHYFRERGYDFKISNGRVVVYKPEKRKRRRRRQSQRVIPFE
PGSPLQIILRQRVSDRSVTWTGPGFVRVQDGAGLRFTVSNIPATLDYYVVVRYEPESTDD
WTAIVNVVPLGSGDGRCQNDPSEKVFTLSGSGRTATLDLPVCLNDGNKYHVDVAFRKQHK
AGPQTSSYILIDSLGLIPKVDSIPNFCSQSHLSQFQQYRCIELGAQAGEQTLSEVCEKHI
GSMSAFIHNGAMACNCHQVGAFSSTCSKFGGKCQCKPNVIGRCCDSCAPVTYGLGPNGCS
PCDCDPSGSTAELCDQTTGQCPCRDGVTGRRCGKCYPGYYGFPQCRRCQCNRLADICDAI
TGDCLDCREHSTGPNCERCKYGYVGDPVSGQPCEPCLCPDVDGSGRFFAISCNKDPYSGA
SNCECLPGHTGQHCDSCAPGYFGDLRLPGGRCEECCCNNNIDSRDGDACDAVTGECLRCL
HNTEGPRCQSCKIGYYGNALAQDCKECSCDRRGTDDTKCQAGSPCFCDQETGKCPCRKGV
KGALCNECADGYWNLDGESGCEPCNCDPEHALNYVCEKITGQCFCQPEHGGRTCDECGPN
HFGNPDIQCISCDCNMEGTIFPACDTYTGECLCKPGVTGLFCDECAPGHDTNFPTCEPCH
TCYHLWEKIVSDIKLDAERIETMMPCPEDYRPPSDLQHLQNLLEKLQSLLNMTAQDELEK
LEKLLARIRNETETIDPNIIVIDPTILLNTDIDNIRLEFNRLLKNLREKAKEVPVTDVKA
NDILNKIKKLYDEFTDSVKKVEAAKKTQEASRKTRENATLELAKCRIGEMDKLEKKVKAL
SIANLNEEVCGAPGDAECEKAKCGGALCGMCGGPACTGSLPISLNASKLAEVTEKNITAL
RSKLKEDDAKLMNTSKITNYIKDQAEEMMNKMNQTKNKYEKEKTDTKNLIEKLKNYLRDE
MVRPEDIEKLANAVLSIQLPKSPDEIKDMIENIKKILENITDFNDDLEHLEKQAKIAENL
KERAKEILNRTEAIDVREIEKALKDTEELNDKIANDLEEAEENNDVISGKVNETEPKLKN
IEDNLDSTQAKKLLDEIQALKNKTEMNRAQGKEAKDAANAALASAKDVDKDLEELKEQFE
KFKLNSTNQNVNEEANERLKNITMEAEILAKSVEDKMKKIEELEKRILLATEKKEERMKD
LEALQEEADYLKNFIVDKVEKYGLCST
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgattggagacatcagcgttcctgcttctcttgatagcagctccagtccgc
ctccaggacgaatgtgtggggaattcgtgttatcctaacctcggtgacctcatggtgggc
cgtgccgcccaactcactgcttcttcaacctgtggcctctacagaccacaaaactattgt
atcctgggatacctggagaatgagcgcaagtgcttcacctgtgactccagcagcccctac
aatctccaccacaatcccaacagccaccgcatagagaacatcatcaccaccttccgaccc
gaacgcaagatgaggtggtggcagtctgagaatggtgtgcatgaagtcagcattcagttg
gatctggagtcaatgtttcagtttagtcatttgatattgacattcaagagtttccgacct
gctgccatgttggtcgagaggtcaaaagactttgggagaacctggaaggttttccgttac
ttcgcagaggactgtgccaactcattccccggcgtctctgaggagccagcagacagtatt
gatgacctcatctgtgacagtcgctactctggggcagagccatccaccgatggagaggtg
gtgttaaaagccttggatccaagttttgacatccatgatccatacgactctactatacaa
gagctgatcaccctgacgaacctgcgagtaaactttacccgtttgatcaccctgggcgac
acgttgctcacgagacggaggaggaacccacaggagaagtattattacgccctctatgag
atggtcgttcgggggagctgcttctgcaatggccacgccagtcagtgcgttcccgtggac
ggcacacgtggagacaccttcagtgagcctggcatggtgcacggtagatgtgtttgccaa
cacaacactgtagggtacaactgtgagctctgtcaagacttctaccatgacgccccctgg
aggccagggggaaaaacagactcagatgtttgcagaagatgtaactgtcatggccattca
gagaagtgtcactttgacctagcacgctatctggccactggtggggttagtggtggtgtg
tgtgatgactgcaggaataaccgtgtaggatctcagtgtgagctgtgtgggccatattac
taccaggaccctcaacgctctgtggacgaccacaacgcctgtatatcttgtgaatgcgat
cctgatggctcagtggaccgtggtgtgtgtgatccagtgactggccagtgtgtgtgtaaa
cagaacgttgaaggagagcgctgtgaccgctgcaagtttgggttctacgggttcaaccgg
gatgacccaagcggctgtcagttgtgcaggtgtaatttcatgggaacgatacgcacggac
aacccttgtgatcagaccacaggaaggtgtatttgtgagaactttgcttacggcccggag
tgtgaccagtgtctgccaggttactggggtctgggaaacacagtctatggctgcttaccc
tgcgactgtgacgttggaggggccctgagaactgaatgttcctctgtggatggccagtgt
gaatgcaggcctaacatggtgggccacaaatgtagtgatccagcccctggatatttcctg
gctcctcttgatttctatatctatgaggctgagaacgcagtgcctctggcggcaaattct
ccatttattcaggccccaaccgtctacctcccagaacagatacctgatcgaccagccaag
ctccctctatgtccctttggtccgaagccctccccaatacccaataaagaacctgaaccc
caaacggtgaagccatcttcgaccccatacaacccccatgtcaccctgcccatctgtgag
cactacttcagagagaggggttatgacttcaagatcagtaatggaagggttgtggtgtac
aaacctgagaaacggaaaagacgaagacgaagacaaagccagagggtaatcccctttgaa
ccaggctcccctctacagatcatcctgcgacaacgtgtctcagatcggtctgtcacttgg
actggaccgggttttgtgcgggttcaggatggggcaggactcagatttactgtcagcaat
ataccagcaactcttgattactatgtagttgtccgctatgagccagagtccaccgatgat
tggacagctattgtgaatgttgtcccacttggatcaggggatggacgttgtcagaatgac
ccatccgaaaaagtgtttactctttcaggctctggaaggacagccactctggatcttcca
gtgtgcctcaatgatggtaataaataccatgtggacgtcgcttttagaaagcagcacaaa
gcaggccctcagaccagctcatacatcctgattgactctttgggcctcattcccaaagtg
gactccatcccaaacttctgttcgcagtcacatctatctcagtttcagcaataccgctgt
attgagttgggagcacaggcaggagagcaaaccctatctgaagtatgtgagaagcatatt
ggaagtatgtctgcctttattcacaatggtgcaatggcttgcaactgtcaccaagttgga
gcgtttagctcaacatgcagtaaattcggtggaaagtgtcaatgcaaacctaatgttatt
ggccgttgctgtgattcctgtgctcctgtgacgtacgggcttggacccaatggctgctca
ccatgtgactgtgatccatctggctctaccgctgaactgtgtgaccagacaactggtcag
tgcccgtgtcgagatggagtaactggccgtagatgtggtaaatgttaccctggttactat
gggtttccccagtgcagacgatgccaatgcaacaggttggctgacatctgtgacgccatc
actggagattgtttggactgcagggaacactccacgggaccaaactgtgaaaggtgtaaa
tatggttatgttggtgaccctgtatctgggcagccatgtgagccatgtttatgtccagat
gtggatggaagtggacgcttctttgccatttcgtgcaacaaggatccgtactctggagcc
tcaaactgtgaatgtctgcctggacatacaggccaacactgtgactcctgcgctcctggt
tatttcggtgacctgaggttgccaggtggccgatgcgaggagtgctgttgcaacaataac
attgattctcgagatggtgatgcatgtgatgctgtgactggcgagtgtttgcgctgctta
cacaacacagaagggccgcgatgtcagagctgcaaaattggatactatggcaatgcactc
gctcaagactgcaaagagtgttcttgtgaccggagaggcacagatgacacaaagtgtcag
gctggaagcccctgtttctgtgaccaggaaaccggcaagtgcccatgtcgaaaaggtgtc
aaaggagccctttgtaatgagtgtgcggatggatactggaacctggatggggagtctggg
tgcgagccttgcaactgtgacccagaacatgctctcaactacgtctgtgaaaagatcaca
ggccagtgtttctgccagccagagcatggaggcagaacatgtgatgagtgtgggccgaat
cactttggaaacccagatatacagtgcatatcttgtgactgtaacatggagggtaccatt
tttccagcttgtgacacttacacgggtgagtgtttgtgtaagccaggggtgacaggcctt
ttctgtgatgaatgtgccccgggtcacgacaccaactttcctacctgtgaaccctgccat
acctgctaccacctctgggagaaaatcgtctcagatattaaactagatgctgagaggata
gaaactatgatgccttgccctgaagactatcggcctccatctgatctacaacacttacag
aatttgttggagaagttgcagagtctcctaaacatgactgctcaggatgagcttgaaaaa
ctagagaagctcttggcacgcattaggaatgaaacggagaccattgatccaaacataatc
gttattgatccaaccatacttctcaacactgacatcgacaacatccgccttgagttcaat
aggctgttgaagaatctcagagagaaggcaaaagaggttccagtgacagacgtaaaagct
aatgatattttgaataagatcaaaaagctctacgacgaattcactgacagtgtgaagaaa
gtggaagcggctaaaaagacccaagaagcctccaggaagacaagagagaatgccacattg
gaacttgcaaagtgtcgcataggagaaatggataagctggaaaagaaagtgaaagctttg
agcattgccaatctcaacgaggaggtttgtggggctccaggtgatgcagaatgtgagaaa
gcaaaatgtggtggagctttgtgtgggatgtgcggggggccggcctgtacagggagttta
cccatcagcctcaatgcctccaaactggccgaggtgaccgagaagaacatcactgccctg
cgcagtaaactcaaagaagatgatgctaagctcatgaacacctcaaaaattactaattac
attaaagatcaagcagaggagatgatgaataaaatgaatcagactaagaacaaatatgaa
aaggaaaagactgacaccaagaacctcatagagaagctcaagaactacctaagagatgag
atggtgaggccagaagacattgagaaactggccaatgctgtgttgtccattcagctaccc
aagtcccctgatgagatcaaggacatgattgagaacatcaagaagatcctggaaaacatc
acagacttcaacgatgatctagagcacttagaaaaacaggccaaaattgcagaaaacctg
aaggagagggccaaagaaatattgaacagaaccgaggcaattgatgtgagggagatagag
aaagcactgaaagacacagaagagctcaatgacaagatagccaatgatctggaagaggct
gaagaaaacaatgacgttatcagtggcaaagttaatgagactgaacctaaactgaaaaac
attgaggataatttggattcgacccaagccaaaaagttactggatgaaatccaggccttg
aagaacaagacggagatgaacagagctcaggggaaggaggccaaagatgctgccaatgca
gctctcgccagtgccaaagatgtcgacaaagatcttgaggaactgaaagagcagtttgaa
aaatttaaactgaatagcacaaaccagaatgttaacgaagaggccaatgaacgtctaaag
aacatcacaatggaggcagaaatactggctaaatctgtggaggacaaaatgaagaaaatt
gaagaattggaaaaaaggattttgcttgcaactgaaaaaaaagaggaaaggatgaaagat
ttggaggcactccaggaggaggcagattatttgaagaactttatagttgacaaagtggaa
aaatatggtctgtgctccacttaa
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integrated database retrieval system