Phoxinus phoxinus (Eurasian minnow): 306995553
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Entry
306995553 CDS
T12064
Symbol
tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pphx
Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphx03019
]
306995553 (tia1)
03041 Spliceosome [BR:
pphx03041
]
306995553 (tia1)
Messenger RNA biogenesis [BR:
pphx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
306995553 (tia1)
Spliceosome [BR:
pphx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
306995553 (tia1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
306995553
NCBI-ProteinID:
XP_079463386
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All DBs
Position
3:complement(38855459..38864964)
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AA seq
407 aa
AA seq
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MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDHLDTSRGVNPHLPHDSVM
IPRTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVF
VGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGG
QWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQL
MRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHLVKCYWGKETTD
MVTPMQQVQVPQQNKVGFAAQPYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQG
FNHLQAGAGWTGVSAVSNGGVVEPAQGVNGAVLANQSSMGTAGYHTH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgttggaaacttgtcacgggatgtgacc
gaggcccttattatgcagctctttggtcaaattggcccctgtaagagctgtaaaatgata
gtggatcatctcgatactagtagaggcgtgaatcctcacttgcctcatgattcggttatg
attccaaggacggcaggtaacgatccatactgctttgtggagttcttcgagcataggcac
gcagcggcctcactcgcagccatgaatgggcgtaaaataatgggtaaggaggtaaaggtg
aactgggctacatcaccaagcagccagaaaaaagacacaagcaatcacttccatgtcttt
gttggagacctcagtccagaaatcaccactgatgatatcagagctgcctttgcacccttt
gggaggatatcagatgcacgtgtagtgaaagacatggcgacggggaagtcaaaaggctat
ggttttgtttcgttcttcaacaaatgggatgcagagaatgccattcagcagatgggaggt
cagtggttgggtggcaggcagatcaggactaactgggctacaagaaaacccccagcacct
aaagccacctatgaaacaaacaccaagcacttgtcgttcgatgaggtagtgaaccagtcc
agccccagcaactgcacagtttattgtggtggagtcactacgggccttacagaacaactc
atgagacagaccttttccccctttgggcaaataatggaaataagagtgttcccagacaaa
ggctactcgttcgtgaggttcaactctcatgaaagtgcagctcatgcgatagtgtctgtt
aatggcacatccctagaaggtcatctagtgaaatgttactggggtaaagagactacggac
atggtgacccccatgcagcaggtgcaggtaccccagcagaacaaagttggtttcgccgca
cagccatacggccagtggggacagtggtacggcaacgcacaacaaatcagtcagtatgtc
cctaatggctggcaggtacctacttacggcgtgtacggacaggcttggaatcaacagggc
ttcaatcacttacaggctggcgctgggtggactggtgtgagtgccgtgagtaacggaggc
gtggtggagcctgcgcagggagtcaatggagctgtgctagccaaccagtccagcatgggc
actgcaggataccacacacactga
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