Phoxinus phoxinus (Eurasian minnow): 306996890
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Entry
306996890 CDS
T12064
Symbol
med13b
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pphx
Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphx03021
]
306996890 (med13b)
Transcription machinery [BR:
pphx03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
306996890 (med13b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
306996890
NCBI-ProteinID:
XP_079465942
LinkDB
All DBs
Position
4:31246769..31277501
Genome browser
AA seq
2101 aa
AA seq
DB search
MMSSCFVPNGASLEDCHSNLFCLADLTGIKWKCFVWQGPTSSPILFPVTEEDPILCSFSR
CLKADVLSVWRRHQTPGRRELWIFWWGDDPNFAELVHHDLSCNEDGSWDSGLSYECRTLL
FKAIHNLLERCLMNRSFIRIGKWFVKPYEKDEKPINKSEHLSCSFTFFVHGDSNVCTSVE
INQHQPVYLLSEEHLTLAQQSSSSVQVILSPYGLSGTLTGQSFKLSDAPTQKLIEEWKQF
YPIGPNSKEVTDDKMDDLDWEDDSLAAVEVVVAGVRMVYPANLVLVAQSDIPVMAAVSSS
TSLGSYSGGQHSQMIHGDTGISSVTLTPPTSPEEAQAVSQPAQKLVKLSAMSGAFSVDSS
SHHGGKIPRRLASQMVERVWQECNVNRAQNKRKFSTMSNGACEEETDKASVWDFVESSQR
SQCSCSRLKNQKQRACSTPGLPPSAGQPPQPSTKHKMAEKLEKGDKQQKRPQTPFHHRSS
LCEEHPNLEQGEGVHRLCLQGHEDSRYPSLLHADVTSSKTPMLHSSVDEMTGSPQPPPLS
PHPCEHGEDANDLKSSSSPLHQHFYPSSEPCLVPQKPTDDSPLDPLPLACPPPYPESLEA
TVYMGSAINPNEDMSHNPWRYFRVPGGKNADFHTPHLPAVTLFEDGNRAGSQDGVVSVTE
LMSSSKRPLKVSEELVKMYEHKKNQYLSAAVCNENQEGESDPYAFVEGDEDFMFSDKDKK
PGPERETGKRNKRDDDSLSSDDAQGSGGGKPLPTTSLIHETDLVVSINDLDNLFNSDEDD
LTPGSRRAAGGAEDKFGGKEPKPAAPDPLPCSADLHQMFPTPPSLEQGYSPINMGNTESA
AGLSLLDGAISGNFKMEVEEGFCSPRPSEIKDFSYVFKTESCQALIGCSLYAPLKMLPSQ
CLLPIKLPEECIYRPSWTVAKLEMLQPMTAMTFLHKDSNIPSVGSAVEQDQSCTPQTHNT
FMSNSAPPSNSGAGILPSPATPRISAPTPRTPRTPRTPRGPASVQGSLKYENSDLYSPAS
TPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCNMNITGAD
VGVYISDPNMDPQYSSMDPCSCGFSAVMNRRYGNGAGLFLEDELDIMGRGSDAGRETEKH
FEAVRAASLQRGAVLKEQVPDDLVLLLQDLCTNPFSPIIRPELLSTSFKLPMRLEERDYY
SDCYLALEHGRQFMDNMSGGKVDETLVKSSSLHHWAKRNAFDMSMLFSQDVVRMLLSLQP
VLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTLLVGYEYDYVVL
SPFALPYWEKLLLDPYSSQRDIGYMVVCPDNETLLNGAKTFFRDLTAVYESCRLGQHRPI
AKSHADGIVTVSDTGSQPFADQTFTDWLPKTINSSSEAFNKLRLYAQVCRQDLVSCLASQ
SLDSSLLSQRNPTSSSQTSSSSSPTTVAQNTTPTTNSTSNTNPTTATPTTTTSTTSSSCS
QGISSLPSSKPNSLPTFGAQGLQSSQPSSGQSAGTLGDGSSTTSQPQVQSEPPESTMDRE
KVGVPTDGDSHAVTYPPSIVIYIVNPFSYEETGQGGNSSVWTMGLLRCYLEMLQFLPPHI
RNAVYVQIIPSQYLLQPVWSEERHIYAQHLKSLAFSVYTQCRRRLPTSTNVKTLTGFGPG
LAIDTALQSKERPECLHLYAPPFILAPVKDKQTELGETFGEAAQKYNVLFVAYCLSHDQR
WLLASCTDQYGELLETCIISIDVPNRARRKKGSARRQGIQKLWEWCLGLVQMTSLPWRIV
IGRLGRIGHGELRDWSILLSRRNLQSLGRRLKEMCRMCGISAADSPSILSTCLVAMEPQA
SFVIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSAGLQAFNPNNDVTDG
MGGMDGILDLLSENDLVDPDLINILPNSPTTSPVQSPGSHYHHGGDGSKGQSTDRMESHD
ESPNILQQPMALGYFVSTAKAGPLPDWFWSSCPQAKNQCPLFLKASLHLNVSSVQSDELL
HSKHSHPLDSSHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLNQMYNFIMNM
L
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcttgttttgtacccaacggggcgagcctggaggactgccactccaatcta
ttctgtctggctgacctcacggggattaaatggaagtgttttgtatggcagggccccacc
tcgtcccccatcctcttcccggtgacggaggaggaccccatcctgtgcagcttcagtcgc
tgcctgaaggcagacgtgctgagtgtgtggcggaggcaccagaccccgggccgacgggag
ctctggatcttttggtggggagacgaccccaactttgcagagctcgtccaccatgaccta
tcatgtaatgaggacggttcatgggatagcggcctgtcctacgagtgccgaacgctgctc
ttcaaagccattcataacctgctggaacgctgcctcatgaacagatccttcatccgtatc
ggcaagtggttcgtcaaaccctacgagaaggatgagaagcccatcaacaaaagtgaacac
ctgtcctgctccttcacattcttcgtacacggagacagtaacgtgtgcaccagcgtggag
attaaccagcaccagcccgtctacctgttgagtgaggagcacctgacattggcccagcag
agcagcagctcggttcaagtgatcctttctccgtacggtttgagtgggactctgacgggc
cagtccttcaagctctcagatgcaccgacccagaagttaatcgaagaatggaagcagttc
tatcccataggccccaacagcaaggaggtcactgacgacaagatggatgacctcgactgg
gaggatgattccttggctgctgttgaagttgttgttgctggggtcaggatggtgtaccca
gcgaacctggtgctggtggcccagtcggacatcccggtaatggccgcggtgagctcttcc
acctccttgggttcttactcaggaggtcagcacagtcagatgatccatggagatactggg
atctcttcggtcactctgactcctcccacttcacctgaggaggctcaagcagtctctcag
cctgcccagaagttggtgaaactctcagctatgtcaggcgcctttagtgtggacagcagc
agtcatcacggaggcaagatcccccgccgcctagccagccaaatggtggaacgagtctgg
caggagtgcaatgttaaccgagcccagaacaagagaaagttttcaaccatgtctaacgga
gcttgcgaggaagaaacggacaaagcttctgtttgggactttgtagagtcatctcaaagg
tcacagtgcagttgctcaaggcttaagaaccagaaacagcgggcatgtagcaccccaggg
cttcctccatctgctggccaacctcctcagccatctaccaaacataagatggcggagaag
ctggagaagggggacaagcagcagaagaggccccagacgcccttccaccaccgtagctct
ttatgtgaagaacatcctaacttggagcagggggagggtgttcacaggctttgtctgcag
ggccacgaggacagccgctaccccagcctcctccacgccgacgtcacctccagcaagacc
ccgatgctgcacagctcagttgacgagatgaccggctccccgcagcccccgccgcttagc
ccgcacccttgtgagcacggagaggatgccaatgacctaaagagttcctcttcgcccttg
caccaacacttttatccttcctctgagccctgcctggtgccccagaaacccacagatgat
tctccactagacccattgcccttagcatgcccacctccatacccagagtccctagaagcc
accgtatacatgggctccgctataaaccccaacgaggacatgtcgcataacccctggagg
tactttagggtgcctggagggaagaatgcagatttccacacacctcatcttcctgcggtc
acgctctttgaggatggtaacagggccggaagccaggacggtgttgtctcagttacagag
cttatgtcctcctccaaaaggcctctgaaggtgtcggaagagctggtgaagatgtacgaa
cataagaaaaaccagtatctttctgcagctgtgtgcaatgaaaaccaggagggagaatct
gatccttacgcttttgtggaaggagacgaggattttatgttctctgataaagacaaaaag
cctggacccgagagggagaccggaaagagaaataagagggatgatgacagtttatcttct
gatgatgcccaggggtcaggtggaggtaaaccacttcctaccaccagcttgatccatgag
accgatctggttgtgtccattaatgacctggacaacctctttaactctgacgaggatgac
ctgacgcctggatccaggagagctgctggtggagcagaggacaaatttggtgggaaagaa
ccaaaacctgcagcgcctgaccccctgccttgctctgcagacctgcaccagatgttccca
acccctccgtcactggagcagggctactctcctataaacatgggcaatacagagtcagct
gctggcctgtctcttctggatggggccatcagcgggaacttcaagatggaggtggaggag
ggtttctgtagccccagaccctcagagattaaggacttctcctacgtgtttaagacggag
tcctgccaagccctcatcggctgctccctttacgcccctctgaagatgctgcccagccag
tgtctgcttcccatcaagcttccagaagagtgcatttaccggcccagctggacagttgcc
aaactggagatgctgcagccaatgacagccatgaccttccttcacaaggacagtaacatc
cctagtgtgggaagtgcagttgaacaggaccagagctgcacccctcagacacacaacacc
tttatgtccaacagcgccccacccagcaacagcggcgctggcatcttgccctcccccgcc
acccctcgaatctctgccccaacgccacggacaccccggaccccacgcacccccagaggc
cctgccagcgtccagggctcactgaaatatgagaactctgacctctattctcccgcctct
acaccctccacctgcagacctttaaattcagttgagccggccaccgtgccctccatccca
gaagcgcacagcttatacgtcaccctcatcctctccgagtcagtcatgaacctttttaag
gactgcaactttgacagctgttgcatctgcgtctgcaacatgaacatcacaggggcggat
gtgggcgtctacatcagtgatcccaacatggacccgcagtactcaagcatggacccctgc
tcctgtggttttagtgccgtcatgaaccgtcgctatggcaacggggccggcctcttcctg
gaggatgagctggacatcatgggacggggttcggatgccggacgggagacagagaagcac
tttgaggctgtacgtgcagcctcacttcagagaggggcggtccttaaagagcaggtcccg
gatgatctcgtccttctgctgcaggacctatgcacgaaccctttctcccccatcatcagg
cccgagcttctcagcaccagtttcaaactccccatgcgcctggaggagagggactattac
agtgactgctatttggctcttgagcacggcagacagttcatggacaacatgtctggagga
aaagtcgatgagacgctggtcaagagctcctctttacaccactgggcgaaacgcaacgct
ttcgatatgagcatgctgttctcccaggatgtggtgaggatgctactgtcacttcagcct
gtcctgcaggacaccattcagaagaagaggtctgtgcgctcttggggggtccagggcccc
ctcacctggcagcagtttcacaagatggctggcaggggatcgtacggcacggatgaatct
ccagagcccctccccatccccactttactggtgggttatgagtatgactatgtggtgctg
tctcctttcgctctgccatactgggagaagcttctgctggacccgtacagctcccagagg
gacatcggatacatggtggtgtgtcccgacaatgaaactctgcttaatggagccaagact
ttcttcagagacttgacagcagtatatgagtcctgtcggctcggtcagcacaggcccatc
gccaagtctcacgctgatggcattgtgactgtgagtgatactggatcccagcctttcgca
gatcagactttcactgactggctcccaaaaaccatcaacagcagcagcgaggctttcaac
aagctcagactttatgcgcaagtgtgccgacaagacttggtgtcctgtctggcatcccag
tctttggacagctcactgctttcccaacgaaaccctaccagctcttcgcaaacttccagc
tccagtagccccaccacagtcgctcagaacaccacccctaccaccaacagcacctccaac
actaaccccacaaccgccactccgaccaccaccacatccaccacctcttcctcctgctct
cagggcataagttccttgccgtcttccaagcccaattccctgcctacctttggggctcag
ggcttgcagtccagtcagccgagcagcggtcagagtgcagggacactgggggacggctca
tcgaccaccagccaacctcaggtccagtctgagccaccagagagtacgatggatagagag
aaggtgggggtgccgactgacggagactcccatgccgtcacttatcctccctctatagtg
atttacattgtgaaccccttcagctatgaggagacaggccagggaggcaattccagtgtg
tggacgatgggtcttctccgctgttatctggagatgcttcagtttcttcctcctcacatc
aggaatgctgtatatgtccaaattatacccagccaatacttgctgcagccggtctggagt
gaggagcgccatatatacgcacagcacctgaagtctctggctttctcagtttacacacag
tgcagacggcgtctgccaacctccactaatgtcaaaacgctaacaggctttggccccggt
ctggccattgacactgcactacagagtaaagagagaccagagtgtttacatctctacgca
ccgccattcatcctggcaccagtgaaggacaaacagacagagctgggtgagacttttgga
gaggctgcgcagaaatacaatgtgctgtttgttgcctactgcctgtcacatgaccagagg
tggctcctggcctcatgcactgaccagtacggagagctgctggaaacctgcatcatcagc
attgacgtacccaaccgagctcggaggaaaaagggctctgcaagacgacagggcattcag
aagctttgggaatggtgcctgggtcttgtacagatgacttcacttccttggcgcattgtg
atcggccgacttggaaggataggtcacggggagttacgtgattggagtattttgttgagt
aggcgaaacttgcagtctctcggcagacgactgaaggaaatgtgcaggatgtgcggtatc
tctgctgcggacagtcccagcattctcagtacatgtctagttgcaatggaaccacaggct
tcctttgtcatcatgccagactctgtgtccacgggctccgtgtttggccgcagcacgacc
ctgaacatgcagacgtcccagttaaacactcctcaggacacctcctgcactcacatcctc
gtgttccccacttctgccggcctccaggcgttcaatcccaacaacgatgtcacggatgga
atgggtggcatggatgggatcttggacttgctgtcagagaatgatctggttgaccccgat
ctcattaacatattacccaactctcccaccacctccccagtacagtcaccaggctcacat
taccaccacggaggagacggcagcaagggccagagcacagacaggatggagtctcacgac
gaatctcccaacatcctccagcagcccatggctctgggctactttgtgtccacagctaaa
gcgggtccactgcctgactggttctggtcctcctgcccacaggcaaagaaccagtgtcct
ctcttcctgaaggcttctctgcaccttaatgtttcgtcagtgcagtcagatgaattgctg
cacagtaaacactcccaccctctggactccagccatacctcagatgtgctcagatttgtg
ctggagcagtacaatgccctctcgtggctgacctgtgacccagcgactcaggaccggcgc
tcttgtctccccgtgcactttgttgtgctcaaccaaatgtacaacttcatcatgaacatg
ctctaa
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