Phoxinus phoxinus (Eurasian minnow): 307002736
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Entry
307002736 CDS
T12064
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
307002736 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphx03000
]
307002736 (srebf1)
04131 Membrane trafficking [BR:
pphx04131
]
307002736 (srebf1)
Transcription factors [BR:
pphx03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
307002736 (srebf1)
Membrane trafficking [BR:
pphx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
307002736 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
307002736 (srebf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
ZapB
MTUS1_CCDC69_CC2
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
307002736
NCBI-ProteinID:
XP_079476746
LinkDB
All DBs
Position
1:complement(42901223..42932544)
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AA seq
1128 aa
AA seq
DB search
MNLSFDDPSLETLDSSMSLHDPSDIDSALLSDIDDMLQLINNQDMEFAGLFDHTSFPGPA
APPQDLSALPLPSPSSPPPASSTPTPTSSILSSSPHLDALLGPPITRSSSIPDKVFLPPT
FQQSPLAQVSSTPANPRTLQTTQPKAQPAPSPSLRPSPPAGKSPVFGVTQQLLFSSAQQQ
PVVTFPMQTAYTAVTQQSSPQPIPNLPASPQNVQPMTIQAQMQSLSASPILATASSPPPQ
TISPQVQQVQQVPVLLQPQFIKADSLLLTTLKPDVTMVTTVASPCITTLATSTAPVQSTS
LQALMSGGTILTTVPLMVDTEKLPINRIAISGKPGGLPYKGEKRTAHNAIEKRYRSSIND
KIIELKDLVAGTEAKQLNKSAVLRKAIDHIRYLQQSNQKLKQENMALKMSIQKNKSLKDL
VTMEVDVKPEIPTPPASDIGSPQSSGTYSHHGSDSEPDSPMVEDSKPVVERAGGMLDRSR
MALCAFTMLFLSFNPLASLLCGGWSSSGASVSGHTGRSMLAMQEAADSWGWMDWMLPTLM
VWLLNGVLVAGVLIRLLVYGEPVTRPHSESSVLFWRHRKQADLDLARGDFAQASQNLWTC
LKALGRPLPTSQLDLTCAVLWSALRLCLQRLWVGRWLASRAGALRSNRPLQEDARKSCRD
AALVYHRLHQLHMTGKLGGSHLSAIHMALSALNLAECAGDCLPVATLAEICVSAALRIKS
SLPRLIHFTTRVFLSSARQACLSPSGSVPPAMQWLCHPLGHRFFVDEDWSIRSTPKESIY
SQAGNSVDPLAQVTQAFREHLLEKALYCVAQPQGDKTLADGDGEYADALEYLQLLTSASD
AAGATTQSFAIGSNMATVTGCDPHSKWWSSVAVVVINWLQGDDVAAERLYPAVEHLPLSL
QAAESPLPKACLNTFKAVRSLLAKPGSYQLSLSHCEKASGLFRDSLNLGPHCTSSTLDKL
VQLLLCDLLLVTRTSVWREQQVVSQQSCPTAASPVELQGFQQDLSSLRKLAQSFRPAMRR
LFLHEATARLMAGASPTRTHQLLDRSLRRRTPGSRTECETHPGQREQAEAVMLACRYLPP
SFLSAPGQRVGMLVDAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTST
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtcttttgacgacccgtccctggaaaccctggactccagtatgtctttacac
gacccgagtgatatcgactcggctctgctcagcgacattgatgatatgctccagcttatc
aacaaccaggacatggagtttgcgggtctgttcgatcacacttcctttcctggtcccgcc
gcccccccgcaggatctgtcagccctgcctctgcccagcccttcctctcctccacccgcc
tcttctacgcccacccccacctcctccatcctcagcagcagcccgcacctggacgccctg
ctgggcccccccatcacccgcagctcctccatcccggacaaggtgttcctccctcccact
ttccagcagtctcctctagcacaggtgagctccacccctgccaaccccaggacactgcag
accacgcagcccaaagctcagcccgccccgtctcccagcctccgcccgtcgcccccggcc
gggaagagcccggtgttcggcgtcacccagcagctcctcttcagctcggcgcaacagcag
cctgtggtcactttccccatgcagaccgcttatactgctgtcactcagcagagctctcct
cagccaatcccgaatctccccgcctccccacagaatgttcaaccaatgaccatccaagca
cagatgcagagcctctcggcttcaccaatcctggccaccgcctccagcccacccccacag
acaatctcccctcaggttcagcaggttcagcaggttcctgttttgctgcagccgcagttc
attaaggcagactctctcttgctcacaactctgaagcctgatgtgacaatggtaacaaca
gtagcgtcaccctgcatcacaacgctggctacatccactgccccagtccagagcacctca
ctacaggcgctgatgagcggaggcaccatcctgaccaccgttccactgatggtggacact
gagaaactgcccatcaatcgcatcgccatcagcgggaaaccgggcggcctgccatataag
ggcgagaaacgcaccgcccataacgccattgaaaaacgctaccgctcctcaatcaacgac
aagatcattgagctcaaagacctggtggctgggacggaagctaagcagctcaataagtcg
gcagtgttgagaaaagccatcgaccacattcgctaccttcagcagtccaaccaaaaacta
aagcaggagaacatggcactcaagatgtccatccagaagaacaagtctctaaaggacctt
gtgaccatggaggtggacgtgaaaccagaaatccccacccctccagcgtcagatatcggc
tcgcctcagtccagcggcacctactcgcaccacggcagcgactctgagccggacagccca
atggtggaagacagcaagcctgtggtggagagggctggagggatgctggatcgctctcgt
atggctctgtgcgccttcaccatgctcttcctgtccttcaacccgttggcatctctgctg
tgtggcggctggagtagctctggggcgtctgtctcaggacacacgggaaggagtatgctg
gcaatgcaggaagcagccgattcttggggctggatggattggatgttgcccactcttatg
gtgtggctgcttaacggtgttctggtcgctggagttttgatccgactgctcgtgtacgga
gaacctgtgaccagacctcactccgaatcatccgtcctcttctggagacaccgcaagcag
gccgatctggatctagccaggggagactttgctcaggcctctcagaacctctggacgtgc
ctcaaagctcttggtcgacctctgcccacgtctcagctggacctgacctgtgctgtgctg
tggtccgccctgcgtctgtgtctgcagagactgtgggtgggccgctggctagccagccgc
gccggagcccttcgctccaaccgcccccttcaggaagacgcccgcaagagctgccgtgat
gccgccttggtctaccaccgtctacaccaactccacatgaccggcaagctcggaggaagc
cacctctctgccatccacatggctctgagcgctcttaacctggccgagtgtgcaggagac
tgtctccctgtcgccacactggcagaaatctgtgtgtctgcagccctacggattaaaagc
agtctaccccgcctgattcacttcactactcgagtgttcttaagcagcgctcggcaggcc
tgtctctcgcccagcggcagcgtccctcctgccatgcagtggttgtgtcatcctctgggt
catcgtttctttgtggacgaggactggtccattcgcagcacccctaaagagagcatctac
agccaggcaggaaactcagtcgacccgctggctcaggtgacccaggcgtttcgggagcat
ctgttggaaaaggccctctactgtgtggcacagcctcaaggcgacaagaccctcgctgat
ggggacggggaatacgcggacgctctggaatacctgcagttactcaccagcgcgtcagac
gcagcaggagccacaacacagtccttcgccatcggatcaaacatggccaccgtcacaggc
tgtgaccctcactccaaatggtggtcgtctgtggccgtggtggtgattaactggctccag
ggcgatgacgtggcggcggagagattgtacccggcggtggaacacttgcccctcagcctt
caggccgctgagagtccgctgcccaaagcctgcctcaacacttttaaagcggtgcgctcc
ctgctggccaaacctgggagctaccagctcagcctcagccactgcgagaaagccagcggc
ctgttcagagacagcctgaacctcggcccacactgcaccagcagcactctagacaagctg
gtgcagttgctgctgtgcgatctgctgttggtgacgcgcactagcgtgtggcgggagcag
caggtggtgtcccagcagagctgtccgacggccgcctcacctgtggagctgcagggcttc
cagcaggacctcagctccctccgcaagctcgctcagagcttcagaccggccatgcgcagg
ttgttcctgcatgaagccacagctcggctgatggcgggcgccagtccaacgcgcacacac
cagctcttggaccgcagtctgcgccgccgcacgcctggaagcagaacagagtgtgagact
catccaggccagcgtgagcaggccgaggccgtgatgctggcgtgccgttacctgcccccc
tccttcctgtccgccccgggccagagggtgggcatgctggtcgacgccgcccgcacactg
gagaaactgggcgacaagcgcaccctccacgactgccaacagatgatcatcaaactcggc
agcgggacgaccgtcacgtccacctag
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