Phoxinus phoxinus (Eurasian minnow): 307004333
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Entry
307004333 CDS
T12064
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform 1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
307004333 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphx03000
]
307004333 (arid2)
03021 Transcription machinery [BR:
pphx03021
]
307004333 (arid2)
03036 Chromosome and associated proteins [BR:
pphx03036
]
307004333 (arid2)
Transcription factors [BR:
pphx03000
]
Eukaryotic type
Helix-turn-helix
ARID
307004333 (arid2)
Transcription machinery [BR:
pphx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
307004333 (arid2)
Chromosome and associated proteins [BR:
pphx03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
307004333 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
307004333
NCBI-ProteinID:
XP_079479591
LinkDB
All DBs
Position
9:complement(1661833..1686931)
Genome browser
AA seq
1575 aa
AA seq
DB search
MANSTGKNLPEPRRKGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLGALYVRVVSLGGF
AKVSDKNQWTELGEDFNFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEEDEEEQPGNPKH
LLPIGAIPTSYNYQQHTVSDYLRQSYGLSTDFIPPSDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKEPKLVTLLLAHAGVFDDSLGSFSAVFGTDWREKTSRDFVRFWKDV
IEDNEVKDLISDKSSTPQIVFSVGSETRDVCTSLFHPARSVGIGDVEGQRVLQVAMILRN
LSFEEANIKLLAANRTCLRFLLLCAHCSFIQLRQLGLDTLGNVAGELQLDPVDFRTTHLM
FHTITKCLLSRDRFLKMRAMEILGNLSKVEDNGVLICEYVDQESYREVIALLTLPDIMLV
ISALEVLYQLAELGEITCSKISSVERSIDLLVRLVSVDLHTFGPDALTAVKLIEHQASSC
QVSEVRPQLVEHVPPPTQGTPGTVNRTPVQSTPPPGIVEVDGEKFTNQWLNAHFEVHPDC
SVSRSEMYSEYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLSGQAQIHVVG
VRKRSIPLPVQLYYQQQASPAPVPKHEAPSETPQAQSALPPGVGVQLVRAPAPSLTAGPA
SPQVAFTIHGSSHANAPSAPAPSLTVSRLPMNPPGIATHPPCPPATTPVPIRPNDILKTA
MIQSSIPTASATPAVPNHSGTPTQQPLLHHAPLTLIQQGPAPQGHVFTGRVQGVCPSLAQ
QRSQEAVVLAPPQYVSAPCTSLMAGGQVVTVAGVTSTRVAFQNIAPKPAPQAQSPQPQQQ
TQQQSLVIVSPNQQPNTAFAPAIHQIVLTNPTSQTIQTSPSSPNTPIPNPAPAQPHTVSQ
MLSVKRQFQQAPPPQPPTQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPAPAITRA
PSPQVVYQVTNSGSMPPQPQLNVQLMQSPGAVPISILPGQIISTSTPGTLLQAAPNNQVT
FTVVPNSGFPGQVAQTPPTIGLQLTPPLPIAGATPIPPFRGDKIICQKEEEAKDATGLHV
HERKIEVMENNSVPDGSAKASNGESAEVDGPKLLNGRKFDSSLPPYHSGNSQEATQAPNG
PQGGSEGPGKQTPCDPKKLMVNGVCDLERSDAGSHPCKNIPNHKASKHMGNGEVLSPQKA
HGLTDSLMDTAKAEQAERLANGPSHGAEISNGPNSETLGVRQQHPPHNHSPPPHVSEPPP
ANGTMESRPLKRPLEDGERGNSGIPAKMGVRIVTISDPNNAGNSATMVAVPAGADPSTVA
KVAIENAAQQRPSVPSPLPETNAQQPVSVQTPPPVDQASKGANQSSPAPALSPEQARKPG
QNFKCLWQACKRWFDTPTQVFYHAATQHGSKDVYPGQCQWEGCEPFPRQRLSFITHLQDK
HCSREALIAALKLEEQTQGSNPNTSKSPPAAVSSPPPPRPQKALVNHPSAALMALRRGSR
NLVFRDFTDDKEGPMTKHIRLTAALTLKSIAKYSDCGRKLVRRHENHLCVLALSTMEVST
TLAKCLYELTRSLQA
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaacctccccgagccgcggaggaaaggacaggctttcctg
gacgagctgcggcagtttcaccacagcagaggatctccgtttaaaaaggttcccgtggtg
ggtgggaaggagctggacctgggtgctctctatgtgagagtggtgtctttagggggcttc
gcgaaggtgtcagacaagaaccagtggaccgaactgggcgaggatttcaatttccccagg
agttgctcgaatgctgcttttgttttgaaacagtactaccttcgatatttagagaagtat
gaaaaggtgcatcactttggagaggaagatgaagaggagcagccggggaatcctaaacat
ttgcttccgattggtgcaatacccacgtcgtacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctgtcgacggatttcatccctccatccgattacaacaaa
ctggtgctgtctctcctgtccggtctcccgaacgaggtggactttgccattaacgtgtgc
acgctgctgtccaacgagagcaagcatgccatgcagctcgagaaagagcccaaactcgtc
acgctgttgctggcgcacgctggagtcttcgacgactcattaggcagcttttcagctgta
tttgggacagactggcgggagaaaacgtcacgagactttgtgaggttttggaaagatgtc
attgaagacaatgaagtcaaagatctcatctcagacaagagcagcacaccccaaattgtt
ttttcagttggatcggagacgagggacgtctgcacttctctcttccacccggcacgaagc
gtcggcatcggagacgtagagggccagcgggtgttgcaggtggcaatgatcctgaggaac
ttgtccttcgaggaggctaacatcaaactcctggcagctaatcgcacatgtctgcgcttc
ctcttgctgtgtgcgcactgctccttcatccagctacggcagctgggtctcgacacgctc
ggcaacgtcgccggagagcttcagttagatccagttgatttccgaacaacacatctgatg
tttcacaccatcacgaaatgtttgttgtcacgggatcgttttctcaaaatgagggccatg
gaaatcttgggtaacctgagcaaagtggaggataacggcgtcctgatctgcgagtatgtg
gatcaggagtcgtaccgagaagtcattgccctcctgacgctgccggacatcatgctggtc
atctcggctctcgaggttttgtaccagctggccgagctcggggagatcacatgctcaaaa
atctcctctgtggagagaagcatagatcttctagtgcggttggtgtcagtggacctgcac
acgttcggacccgacgccctgacggcagtcaaactcatcgagcatcaggcctccagctgt
caggtctcagaggttcgaccgcagctcgtagagcacgtcccccctcctacgcaaggcact
cctggcactgtgaacaggacacctgtgcagtctacgcctccgcctgggattgtggaagta
gatggagagaaattcacaaatcagtggctaaatgctcattttgaggttcatccagactgt
tcggtctctcgctctgagatgtactctgaatatctggcaacctgcagcaagatggcgcgg
ggtggtgtgctgacatccaacaacttctacaaatgcctgaggacgctgtttcctaatcac
acggtgaagcgtgttgaggacacacggctgagtgggcaggctcaaatacatgtggttggt
gtgaggaagaggtcgattcctcttcccgtccagctttattatcagcagcaggccagtcct
gcaccagttcctaaacacgaagccccctcagaaacccctcaggcccagtcagcgctgccc
cctggtgtgggagtgcagcttgtccgggcaccagcaccaagccttactgccggcccggca
tcaccacaggtggccttcaccattcacggatcgtcacacgccaacgctcccagtgctcct
gcgccatccctgactgtttcacgactcccgatgaacccgccaggaatagcaacgcatccc
ccttgccctccagccacaaccccagttcccatacgacccaatgacatcctcaaaacagcc
atgatccagagctccatccctacagcatctgctacacctgcagttcccaaccacagcggc
acacctacccagcagcccttgctccatcacgcccctcttacactgatccagcaggggcca
gcgccccagggacacgtatttacaggtcgagtgcaaggagtttgtccttcattggcacag
caacgctcccaagaggctgtggttcttgcaccgcctcaatatgtgagtgcgccatgcact
tccctaatggcaggagggcaggttgtgactgttgcaggcgtgacgagcactcgtgtcgca
tttcaaaacatcgcccccaaaccagcacctcaagcgcagtcgccacaacctcaacagcaa
acgcaacagcaaagcctagtcattgtcagtccaaatcaacaacccaacaccgcattcgcc
ccagccattcatcaaattgtgttaaccaaccccacttctcaaaccatccagacatctccc
tcttccccaaacacaccgatccccaaccctgccccggcccagccacatacagtcagtcag
atgctgtccgtcaaacggcaatttcagcaggctccgccccctcaacccccgacccaacct
acctccacagaatccagtctgatcaaacaattactgcttccgaaacgtggtccttccacc
cctggaggaaaactcatcctccccgctccgcaagttcccgctccggcgatcaccagggcg
cccagtccgcaagtcgtataccaggtgaccaacagcggttcaatgccacctcaaccgcag
ttgaacgtgcagcttatgcagagtcccggtgccgttcccatctcaatcctacctggccag
atcatttccacctctactcctggtacactcctgcaggctgcgcccaacaaccaagttacc
ttcactgttgtgccaaactctggcttccccggccaggtagcgcagaccccgcccacaatc
ggcctgcagttgactccgcctctgccaatcgcgggagccacgcccattccacctttccga
ggtgacaaaatcatctgccaaaaggaggaggaggccaaggatgccacgggattgcatgtg
catgaacgcaagatcgaggtcatggagaataattcggtccccgatggttcggccaaagcc
agcaatggggaatctgcagaggtggacggaccgaagctgctcaacgggaggaaattcgac
tcgagtctacctccatatcactcagggaacagccaagaggctacacaggcgccgaacggc
ccccagggcggcagcgaaggccctggaaagcagacgccctgcgaccctaaaaagctaatg
gtgaacggggtgtgtgacttagagcgatcggacgctggttcccatccttgcaaaaacatt
ccaaatcataaggcttccaaacacatggggaacggtgaggtgttgtcgcctcagaaagcg
cacgggctcacggactctctcatggacactgccaaagcagagcaggcagaacgcctggcc
aacgggcccagccacggcgctgagatctccaacggcccaaactcagagacattgggcgtg
aggcaacagcacccacctcataaccactccccacctccgcatgtttccgagccgcctccc
gctaacggcaccatggagagccggccgctgaagagaccgctggaggacggggaacgaggt
aactccggcatccccgcgaaaatgggcgtacggatagtgaccatcagcgaccccaacaat
gctggcaacagcgccaccatggtggccgtgccggcgggcgcagacccaagcacagtagca
aaagtagcaatagagaatgcagcacagcagagaccaagtgtgccctcgccgcttcctgaa
accaatgctcagcagcctgtgtcagttcagactccgcctccagtggatcaggcttcaaag
ggagccaatcagagttctccagcacccgccctctctccagagcaagcacgcaaacctgga
cagaactttaaatgtctgtggcaagcatgcaaacggtggtttgacacgccaacacaggtg
ttttaccatgcagctacccaacatggcagtaaagacgtgtacccagggcagtgccaatgg
gagggctgtgaaccttttcctcgacagagactatccttcatcacacatctgcaggataag
cactgctcgagggaagcgctcatagctgcactcaaactggaggagcaaacacaaggcagc
aaccccaacacttccaagtctcctccagcggcggtcagcagtcctcctcctcccagacca
cagaaagctctcgtcaaccaccccagcgcagctctgatggctttacgtcgcggctccagg
aacctcgtgttcagggacttcacagacgataaagagggaccaatgaccaaacacattaga
ctaaccgctgccttaacgttaaagagcatcgccaagtactcggattgtggacggaagctg
gtgaggcggcatgagaatcatctgtgtgtgttggcgctgagcactatggaggtctccacc
acgctcgctaaatgcctttacgaactcacgcgctctctgcaggcctga
DBGET
integrated database retrieval system
