Phoxinus phoxinus (Eurasian minnow): 307004923
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Entry
307004923 CDS
T12064
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pphx
Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphx04121
]
307004923 (wdtc1)
Ubiquitin system [BR:
pphx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
307004923 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
ANAPC4_WD40
TPR_19
WD40_RFWD3
DSE1_N
Beta-prop_Aladin
Beta-prop_HPS5
PAC11
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
TPR_2
Beta-prop_RIG_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
ASA1
ANAPC3
TPR_1
TPR_17
TPR_BSK1_C
TPR_16
Beta-prop_VPS8
CFAP251_N
Barstar
TPR_6
CFAP70_TPR_C
TPR_9
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
307004923
NCBI-ProteinID:
XP_079480654
LinkDB
All DBs
Position
10:32151489..32167118
Genome browser
AA seq
673 aa
AA seq
DB search
MTCCETMSLRNVTSDLLHRQIREKRALDFQRHYHVTDPFIKRLGLEAELQGHSGCVNCLE
WNEKGDLLASGSDDQHAIIWDPFRHRKLITMHTGHAANIFSVKFLPHSDDRILITGAADT
KVHVHDLTAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAINPRDNNYMAVGANGPFVRLYDIRMIHNHRKSMSQSTSAGVHT
FCDKRQSIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQRPYTFLLPKKCHPSSEVQNGKTTNGVSNGIHLPASRLKLAKLTSGSSDLPPYL
ERIKQQANEAFAQQQWTQAIQLYSLGLHEASQNAMLYGNRAAAYMKRKWDGDHYDALRDC
LKALSLNPGHLKAHFRLARCLFELKYIAEALECLDDFKGKFPDQAHSSACDALDKDIKAA
LFSKTDSSDDKKGNSSIRFHNFSRKESIPEDEIVLRERSFDYKHRYCGHCNTTTDIKEAN
FFGSKGQYIVSGSDDGSFFIWNKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPVV
RLWNPRPESENENCRVVEDMESAAQANQRRMNADPLEVMLLNMGYRITGLSSRGAEGSDE
DDSSEGQVQCRSS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgctgtgagaccatgtcgctgcggaacgtcaccagcgatcttctgcacaggcag
atcagggagaagagagcgctggacttccagagacactatcatgtgaccgacccgtttata
aagcgtctggggctggaggccgaactacagggtcactctggctgtgtcaactgtctggag
tggaatgagaaaggagatctcctggcctcaggttcagatgatcagcatgccatcatctgg
gatcccttccggcacaggaagctcatcactatgcacacaggacatgcagctaacatcttc
tcagtcaagttcctccctcactccgacgaccgaatcttgatcacaggagccgccgatacc
aaggtgcacgtgcacgacttgacggcgaaggagaccattcatatgttctcagaccacact
aaccgtgtcaaacggatcgcaacggctcccatgtggcccaacaccttctggagcgcagct
gaggacggcatcattaggcagtatgatctgagagagagcagcaagcgctcggaggtgttg
atagatctgacggagtattgcgggcagcttgtggaagccaagtgtctggcaatcaaccct
cgtgacaacaactacatggctgtgggagctaatgggcctttcgtccggctctatgacatc
agaatgatccacaatcacaggaagtctatgagtcaaagtacctcagctggtgttcataca
ttttgcgacaaacggcaatcgataccggatggtgctggacagtattatgtcgcaggtcac
ttacctgtgaagcttcctgactataataacagattacgagttctggtggcaacctatgtt
acattcagtcctgacggtactgaactgctggtaaacatgggtggagaacaggtatattta
tttgatctgacgttcaaacagagaccgtacacttttctgctgcccaaaaagtgccaccca
tcatcagaggtacaaaatggaaaaaccaccaacggtgtgtccaatgggattcatcttcct
gcaagccgccttaaactggctaaattgaccagtggctccagtgatcttcctccttatctg
gagaggatcaagcaacaggctaatgaagcgttcgcgcagcagcagtggactcaagccatt
cagctctacagtctaggcctccatgaagccagtcagaatgctatgctgtacggaaaccgt
gctgctgcatacatgaaacgaaaatgggacggtgatcactatgatgcgctgcgagactgt
cttaaggctttgtccctgaacccaggccacctgaaggcgcacttccgtttagcgcgctgc
ctctttgagctcaagtacatcgctgaggccctggagtgtctagatgacttcaagggcaag
tttccagaccaggcgcacagcagcgcttgtgacgcgctcgacaaagacatcaaggctgcc
ctcttctcaaaaacagactcctctgacgacaaaaaggggaacagctccatccgctttcat
aatttcagccggaaagagtccatcccggaggatgagatcgttctcagagagcgaagcttc
gactacaagcatcgctactgtggccactgcaacacgaccactgacattaaggaagcaaac
ttctttggaagtaaaggccagtacattgtgagcggttcagatgatgggtcatttttcatc
tggaacaaagagacaacgaacctggtgcggatcttacagggggacgagtctatagtgaac
tgcctacagccacatcccagctactgcttcctggccaccagcgggatcgaccccgtggtg
cggctgtggaacccaagaccggagtcggagaatgagaactgtcgggtggtggaggacatg
gagagtgcggcccaagccaaccagcggcgcatgaatgcggatccgctggaggtgatgctg
ttgaacatgggctaccgcatcacaggcctgagcagcagaggagccgagggctcggacgag
gacgacagctcagagggccaggttcagtgccgctctagctag
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