Phoxinus phoxinus (Eurasian minnow): 307004935
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Entry
307004935 CDS
T12064
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform 1
KO
K13342
peroxin-5
Organism
pphx
Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
307004935 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphx04131
]
307004935 (pex5)
Membrane trafficking [BR:
pphx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
307004935 (pex5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_16
TPR_17
TPR_19
TPR_14
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_12
TPR_Slam
TPR_20
ANAPC3
TPR_10
CFAP70_TPR_C
TPR_9
PEX18_PEX21_C
CABIN1_N
ComA
MAS20
DUF4878
Motif
Other DBs
NCBI-GeneID:
307004935
NCBI-ProteinID:
XP_079480689
LinkDB
All DBs
Position
10:17365951..17382009
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AA seq
678 aa
AA seq
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MAMRELVDAECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVSEFLQAP
QRPPHSFDMGQLLEEMQQIDQQNYRQAPQRAPDVAALALSGDWAAEFLSNADSASSSAQA
GLDPADADWTREFINEVADPGRWAEEYLEQSEEKLWLGDLGERVQDKEWTQEYQSGEELR
QTANELLAKVDDPKLKNTEFLRFIRQIGDGSVTVEDRAGKEHTDKAQAKEAQHWASSLNQ
FLETREGTVEVETREGKEKNDKVKAKQAEQWATIVRQVSADSAESWVDEFATYGPDFQQA
KAAVESDVDFWEKLQQEWEEMAKRDAEAHPWLSDFDQMLSSSYDKGYQFEEDNPYLSHDD
PFAEGVKRMEAGDIPGAVRLFESAVQKEPDNQLAWQYLGTCQAENEQEFAAISALRRCIE
LKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNPKYRPILEQHEREKEREGVREKEK
ERERFGSLLPEALFSEVQTLFLSAAAADPARVDPELQCGLGVLFNLSGEYDKAVDCFSAA
LSVMPQDYLLWNKLGATLANGNRSEEAVAAYRRALELQPGFVRSRYNLGISCVNLGAHRE
AVEHFLEALSLQRQAAGDGEGGAGRGPGSAVTVMSDNIWSTLRMALSMMGESSLYSAADR
RDLDTLLVHFSQREGETD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagttagtggatgcggaatgtgggggagccaatccccttatgaagctg
actggtcacatgacccaagaaggaggggcttggagacatcgctcaacacccactattcct
cctactccaattgaaatagctacggaagaggagcttgtcagtgagtttctacaggcccca
caacggcctcctcacagttttgatatgggtcaactgctggaggaaatgcagcagatagat
caacagaactacagacaggctccacagagagctcctgatgtggctgctctggcgctgtct
ggcgattgggcagcagagttcttgtctaatgctgactccgcctcttcttctgcacaagct
ggtcttgatccagctgatgctgattggaccagagaattcatcaatgaagttgcagacccg
ggccgctgggctgaggagtacctggagcaatcagaggagaagttatggcttggagatttg
ggagaaagagtccaggacaaagaatggacacaagaataccagtcaggtgaagaactacgt
caaacagcgaatgaactccttgccaaagtggacgaccctaaactcaagaacacagagttc
ctgcggttcattaggcagattggcgatggcagtgtgactgtggaggacagagcaggaaaa
gagcacactgataaagcacaggccaaggaggcacagcactgggcctcaagccttaaccag
ttcctggaaacaagggaagggactgtagaagtggaaacccgagagggcaaagagaagaat
gacaaagttaaagctaaacaggcagagcagtgggctactatcgtcaggcaggtttcggca
gattctgcagaatcatgggtggatgaattcgccacttatgggccagacttccagcaggcc
aaagcagcggtggagagtgatgttgatttctgggagaaactccagcaggagtgggaggaa
atggcgaagagggatgctgaagctcacccttggctctcggacttcgaccagatgctcagc
agctcttacgacaagggatatcaattcgaagaagacaacccctacctgtcccacgatgat
ccgtttgctgagggcgtgaagaggatggaggcgggggacattcctggagccgtacgtctc
ttcgagagcgcggttcagaaagagccagacaaccagctggcttggcaatatctgggcacc
tgccaggcggagaacgagcaagagtttgctgctatcagcgccctccgcagatgtattgag
ctgaaaaaggacaatctgacggctctcatggctctagctgtgagcttcaccaatgagtca
ctgcacagacaggcctgcgagacgctccgtgattggttgaggcacaaccccaaatacagg
cctatcctggagcagcatgaacgggagaaggagagggagggcgtgagagagaaggagaaa
gagagggagagatttggatctcttttgccagaggcactgttcagtgaagtgcagacgctg
tttttgagtgcggcggccgctgaccccgcacgagttgaccctgagctgcagtgtggtctg
ggcgttctcttcaacctcagtggagagtatgacaaggctgtggactgcttcagtgccgcc
ctgtcggtgatgccacaggactatctgctgtggaacaagctgggagcaactcttgcaaat
ggtaatcgctccgaggaagcggtcgctgcttacagacgcgcactggagttacagcctgga
tttgtacgcagccgatacaacctgggcatcagctgtgtcaacctgggtgcacacagggaa
gcagtagagcacttcctagaggccctttctcttcagcgacaggccgcaggggatggagag
ggaggcgcggggcgagggccaggttcagcagtgactgtgatgtcagataacatctggtcc
accttacgcatggcactgagcatgatgggagaaagctcgctatactcggccgccgaccgg
cgagatctggacacgctgctggtgcacttctcccagagagaaggagagacagattga
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