Phoxinus phoxinus (Eurasian minnow): 307008253
Help
Entry
307008253 CDS
T12064
Symbol
csf1ra
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor isoform 1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Pathway
pphx04010
MAPK signaling pathway
pphx04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
307008253 (csf1ra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
307008253 (csf1ra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pphx01001
]
307008253 (csf1ra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pphx04090
]
307008253 (csf1ra)
Enzymes [BR:
pphx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
307008253 (csf1ra)
Protein kinases [BR:
pphx01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
307008253 (csf1ra)
CD molecules [BR:
pphx04090
]
Proteins
307008253 (csf1ra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
VEGFR1-3_N_Ig-like
ig
Ig_PDGFR_d4
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR-1-like_Ig-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
307008253
NCBI-ProteinID:
XP_079487073
LinkDB
All DBs
Position
12:32128373..32155440
Genome browser
AA seq
976 aa
AA seq
DB search
MFAVLFVCGILFARAQGLSEPRIRLNSGALAGSDVTLSSGSPLHLICEGDDPVTWHPRLA
KFKRYISKDVGNIRSFRVDKAAADITGTYKCSYTNGNYSNVSSSVHVFVRDPQNLFVSSG
FTQPLVRKEGEDLLLPCLLTDPDATDFTLLMENRSAIPYGMNVTFDPRKGVLIRNVQPGF
TADYICSARIGGVEKVSKIFKINIRQRLRFPPYVFLRRNEYVKLVGESFQIICTTNNPDF
YYNVTWTHSTRKLPQAEETPKMQGDRLAIESILNIPAVQLSDSGNITCTGQNEAGANSST
TQLLVVDEPYIRLSPKLSSKLTHRGLSIEVSEGEDVDLSVLIEAYPPLTSHQWETPTSHN
ASLPENKLYNYNDRYEALLFLRRLNFQEIGSYTLHVNSSMKNASITFNIKMYKKPVATVR
WENVTTLTCRSYGYPAPSILWYQCAGSRTTCPENTTDLQPIQTQTVEVQKEPHGAVGVES
VLTVGPNRRMTVVCVAFNLAGQGSDVFSMDGSDQLFTSAMYGCGVSMLVLALLLALMLYK
YRQKPRFEIRWKIIEATNGNNYTFIDPTQLPYNEKWEFPRDKLKLGKTLGAGAFGKVVEA
TAYGLGKDDNVTRVAVKMLKASAHRDEREALMSELKILSHLGQHKYIVNLLGACTHGGPV
LVITEYCCHGDLLNFLRSKAENFLNFVMTIPNFPEPTMDYKNVNNERMFIRSDSGISSTC
SDTYLDMKPVTSRPTNSVLGSSSEIQAEDSWPVDMDDLLRFSYQVAQGLDFLTAKNCIHR
DVAARNVLLTNSRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFECVYTVQSD
VWSYGILLWEIFSLGKSPYPNVLVDSKFYKMIKCGYQMSRPDFAAPEMYTIMKMCWNLEA
SERPTFSKIGQLIERMLGDTPDAQETEYQNVQSEEHSDQEPESCDPVKHEEESNETSCDP
EEEDQPLMNANNYQFC
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggtcctgttcgtctgcgggatcctgttcgctcgagctcagggtttgtctgag
ccgcggatcagactgaactctggcgctctggccggatctgatgtgactctcagctccggt
tctcctcttcatctgatttgtgagggcgacgacccggtgacgtggcatccccgactggcc
aaattcaaacgttacatctccaaagatgtcggaaacatccggagcttccgtgtggataaa
gccgcggcggatattacaggaacatacaagtgcagttatacgaacggaaattactcaaac
gtgtcgtcttctgttcatgtgtttgtcagggatccccaaaatctcttcgtctcatcgggt
ttcactcagccacttgtgcggaaagaaggtgaagatctgttgctgccgtgtcttctgacc
gaccccgacgccacggactttacgctcctcatggagaacaggtcagcgataccttacggc
atgaacgtgacctttgaccccaggaaaggtgtcctgattcgcaacgttcagcctggattc
accgccgactacatttgcagcgctagaattggaggagttgagaaagtgtcaaagatattc
aaaataaacatcaggcaaaggttacgttttccaccgtacgtgttcctgaggagaaacgag
tatgtgaaactggtgggagagagctttcagatcatttgcaccactaataacccagacttt
tactacaacgtcacatggacacactccaccagaaagctgcctcaagcagaagagacacca
aagatgcagggcgatcgcttggccatcgagagcatcctcaacatcccggctgttcagctg
tctgactctggcaacatcacgtgtacgggtcagaacgaggccggggccaacagctccacc
acacaactgctggtcgtggacgagccgtacatccgtctctccccgaagctctcttctaaa
ctcactcaccgcggtctgtccatcgaggtgagcgaaggcgaggatgtggatctctcggtc
ttgatcgaagcgtatcctcctctgacctcacaccagtgggagactccaacgtcccacaat
gcctcactcccagagaacaagttgtacaactacaacgacaggtacgaggcgctgctgttc
ctcaggagactgaacttccaggagatcggcagctacacactccatgtgaacagcagcatg
aaaaatgcctccattacttttaatatcaaaatgtacaagaaaccggttgcgacggtgaga
tgggagaacgtcacgactctgacatgcagatcgtatggatatccagctcccagcatcctc
tggtaccagtgcgcaggaagcagaaccacttgtccggagaacaccacagacctgcagccg
atccagactcagacggtggaggtccagaaggagccgcacggggcggtgggagtggagagt
gtgttgacggtgggcccgaaccgcaggatgaccgtggtgtgtgtggcctttaatctggcc
gggcagggcagcgacgtcttctccatggacggctctgatcagctgttcaccagtgcgatg
tacggatgtggagtctccatgctggtcctggcgctgctgctcgccctcatgctctacaag
tacagacagaaacccagatttgagatccgctggaaaatcattgaagccacaaatggaaac
aactacaccttcatagacccgacacaacttccatacaatgagaaatgggagtttcctcga
gataaattaaaactagggaagactctgggcgcaggagcctttgggaaggtggtggaggcc
acggcgtacggtctggggaaggatgacaacgtcacgcgtgttgctgtgaaaatgctgaaa
gccagcgctcatcgagacgagcgggaggctctgatgtcagagctgaagatcctcagtcat
ctgggacagcacaagtacatcgtgaacctgctgggcgcctgcacacacggcggtccggtg
ctggtgatcacggagtactgctgtcatggggatcttctgaacttcctgcggagcaaagcc
gagaacttcctgaacttcgtcatgacgattcccaactttccagagccaacgatggattat
aagaatgtgaacaatgaacgaatgttcatcagaagtgacagtgggatttccagcacatgc
tcggatacctatctggacatgaaaccggtcacatccagacccacaaactctgttctgggc
tcttcttctgagattcaggcagaggattcgtggccggtggacatggacgacttactcaga
ttctcctatcaggtggcgcagggactcgacttcctcacggctaagaattgcattcacaga
gacgtggcggccagaaacgtcctcctcaccaacagtcgagtggccaagatctgtgatttc
ggactggcacgagacatcatgaacgactccaactacgtggtcaaaggaaacgcccgtctt
ccagtgaagtggatggctccggagagtattttcgagtgtgtttatacggttcagagtgac
gtctggtcttacgggatcctgctgtgggagattttttcactggggaagagcccgtatccc
aacgtcctggtggactccaagttctacaaaatgatcaaatgtggctatcagatgtccaga
ccggactttgcagctccagagatgtacaccatcatgaagatgtgctggaacctggaagcc
tctgagagaccgacgttcagtaagatcggtcagctgatcgagaggatgctgggagacact
cctgatgcgcaggagacagagtaccaaaatgtgcagtctgaagagcacagtgaccaagag
ccagagtcatgtgaccctgtgaagcatgaagaggagtcgaatgagacatcatgtgacccg
gaagaagaagatcagccgcttatgaatgccaacaactaccagttctgctga
DBGET
integrated database retrieval system
