Phoxinus phoxinus (Eurasian minnow): 307010279
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Entry
307010279 CDS
T12064
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pphx
Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphx03019
]
307010279 (tial1)
03041 Spliceosome [BR:
pphx03041
]
307010279 (tial1)
Messenger RNA biogenesis [BR:
pphx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
307010279 (tial1)
Spliceosome [BR:
pphx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
307010279 (tial1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
Nup35_RRM_2
Calcipressin
RBD_AKAP-17A
Rodlin
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
307010279
NCBI-ProteinID:
XP_079490946
LinkDB
All DBs
Position
14:complement(14306510..14314085)
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AA seq
388 aa
AA seq
DB search
MDDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEQSDTSRKMNSSIGFSVLQ
QTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWL
GGRQIRTNWATRKPPAPKSVQENSSKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQ
TFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAK
NVQPMEYGQWGHWNQMYSNPQQYGQYMTNGWQVPSYGMYGQTWNQQGFGVEQSQSPAWVG
GFGTQPSQAQPGQVMNQANFGMAGYQTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagagccacccaaaaaccctctacgtggggaatctttcaagagatgtaacg
gagaacttgatccttcagttatttactcagattgggccatgtaaaagttgtaaaatgata
accgagcagtccgataccagcaggaagatgaactcttctattggattttctgttttgcag
caaacaagcaatgatccatattgctttgtggaattctttgaacacagagacgctgcagct
gctttagccgccatgaacggaaggaagattttgggaaaggaagtcaaggtaaattgggcg
actactcctagcagtcagaagaaagatacctctaatcactttcatgtttttgtgggagat
ttgagccctgaaatcacaactgatgacatcagagctgcatttgcaccctttgggaaaatc
tcggatgcacgagtggtgaaggatatgacaacagggaaatcaaaggggtatggatttgtg
tccttctataacaaactggatgctgagaatgctatagtacacatgggcggtcagtggctt
ggtggacggcaaatccggactaactgggcaacccggaaaccacccgcccccaagagtgtg
caagaaaacagctccaagcagcttaggtttgatgaggtggtaaaccaatcgagtcctcag
aactgcacagtgtactgcggtgggattcagtcaggtctcacagaacaccttatgcgacag
acgttttctcctttcggacagataatggagatcagagttttcccggagaagggttattct
tttatcaggttctcctctcatgaaagtgctgctcatgccatcgtctcagtaaatggtacc
accatcgaagggcatgttgtgaagtgctactggggcaaagagtcacctgacatggccaaa
aatgtccaaccgatggagtacggtcagtggggacattggaatcaaatgtacagcaatcct
caacaatacggtcagtacatgaccaatggctggcaagtgccatcctatggaatgtacgga
caaacatggaatcagcaaggatttggtgtagaacaatcacagtctcctgcctgggtggga
ggctttgggacacaaccctctcaggctcagcctggccaagtgatgaaccaggctaacttt
ggcatggccgggtaccagacacagtga
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