Phoxinus phoxinus (Eurasian minnow): 307011102
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Entry
307011102 CDS
T12064
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
pphx
Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphx04131
]
307011102 (lgi3)
Membrane trafficking [BR:
pphx04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
307011102 (lgi3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
307011102
NCBI-ProteinID:
XP_079492558
LinkDB
All DBs
Position
15:4774090..4791158
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AA seq
551 aa
AA seq
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MVEARPRRTLRWPDWRLSVCLLLFCVFGNAAGRKASKIPRCPATCSCTKDSAFCVDTKAI
PKSFPPGIISLTMVNAAFTEIPEGAFSHMHLLHFLLLNSNTFSLISDDAFAGLGHLQYLF
IENNDIQTLSKHTFRGLKSLTHLSLSNNNLQVLPRDLFKHLDILTDLDLRGNSFRCDCKI
KWLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYEVYSFQSLSVES
YEFNNDQYTVFAQPNTGICTVFIWDHVDMLFKTHYNITSRSAVYCKPVVINNTLYMVVAQ
LFGGSHIYKWEEGPLRFVKIQDIDTTRVRKPNFIETFQIEGDWYFAVVDSSKAGSTSLYR
WNSNGFYSHQSLHPWHRDTHIDFLEVDGKPRLILSSSSQPPVVYQWNRSQRQFLYHSQIT
DSGDVQMVKHFWVRKVLYLCLTRFIGDSKILRWDNQRFVEIQTLPSRGSMAVYPFSVGVR
QYLLLGSDYSFSRIYLWDDLTQRFLPFQELNMLAPRGFSLVSVDNKDILLAASFKGKTMV
YQHLVVDLSAK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcaaggcccaggcggactctacgatggccagattggcggctgtctgtttgc
ctgctgcttttctgtgtgtttgggaacgcggcgggccgcaaagcttccaaaatcccacga
tgtccagccacctgctcctgtactaaagacagtgccttctgcgtggacaccaaagccatt
cccaagagcttcccaccaggaatcatctccctgactatggtgaacgctgccttcacagag
attcctgaaggagctttttcccacatgcacctactgcatttcctgctgttgaactcaaac
acattctctctgatttctgatgatgcttttgctggacttggacacctccaatacctattt
attgagaacaacgacatccaaaccctgtcaaagcacacattcagaggactgaagtctctg
acacatctgtctttatccaacaacaacctgcaagttcttcccagagatctcttcaaacac
ctggacatcctcacagacctagacctgcgagggaactcgtttcgttgtgactgtaagatc
aaatggttggttgactggatggagaagaccaacacctctgttcccgccatatactgcgcc
agtccttttgagttccagggtcgacgcatccacgacctcacgccacgcgacttcaactgc
ataagtgcagattttgcagtatatgaggtatactcgttccagtctctgtctgtggagtcg
tacgagtttaacaatgaccagtacacagttttcgctcagcccaacaccggaatctgcacc
gtgttcatttgggatcatgtggacatgcttttcaagacacattacaacatcacatcgcgt
tctgctgtctactgtaaacctgtggtgatcaacaacactctctacatggttgtggctcag
ctctttggaggatcacacatctacaaatgggaggaaggtccattgcgtttcgtcaaaatc
caggacatcgacaccacccgtgtccgcaaacccaacttcatcgagactttccagattgaa
ggcgactggtattttgctgtagtcgacagctccaaagccggctccaccagcctgtaccgc
tggaacagtaacggcttttactcacaccagtctctccatccctggcacagagacactcac
atcgacttcctcgaggtggacggcaaacctcgcctcatcctctccagctcctcgcagccc
ccggtggtgtaccagtggaaccgcagccagcgccagttcctctaccactcgcagatcaca
gattcaggcgatgtgcagatggtgaagcacttctgggtgcgtaaagtgctgtatctctgc
ctcacgcgcttcataggagactcgaagatcctgcgctgggacaaccagcgcttcgtggag
atccaaaccctgccgtcacgcggctcaatggccgtgtatccgttcagcgtcggagtgagg
cagtaccttctgctggggagcgattattccttctctcggatctatctgtgggacgacctc
actcaaaggttcctgcccttccaggaactgaacatgctagcgcctcgagggttcagtctg
gtgtctgttgacaataaggatattctgttagcggccagttttaaaggaaagaccatggtg
taccagcatctcgtggtggacctcagtgccaaatag
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