Candidatus Phytoplasma asiaticum: H7686_0001250
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Entry
H7686_0001250 CDS
T09446
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pphy
Candidatus Phytoplasma asiaticum
Brite
KEGG Orthology (KO) [BR:
pphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphy03032
]
H7686_0001250 (topA)
03400 DNA repair and recombination proteins [BR:
pphy03400
]
H7686_0001250 (topA)
Enzymes [BR:
pphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H7686_0001250 (topA)
DNA replication proteins [BR:
pphy03032
]
Prokaryotic type
DNA Topoisomerases
H7686_0001250 (topA)
DNA repair and recombination proteins [BR:
pphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H7686_0001250 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DnaB_2
YcgL
Motif
Other DBs
NCBI-ProteinID:
UQV27429
UniProt:
A0AAX3B9T0
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All DBs
Position
complement(273222..275183)
Genome browser
AA seq
653 aa
AA seq
DB search
MKSKVIIVESPAKAKTISSFFDHKILVLSSKGHIRNLSLKGKDNLGIDINNNFKPDYCII
KGKESIVRELISKTKDKKVFIATDFDREGEAIAWHLSQVLKLNPLHKNRIFFSEINKNIV
IKAFNNPVIINKRLVESQETRLILDKIIGFKLSSLVHRIRSKSAGRVQSVALKLVAEREK
EHNEFIPEEYFLIKAFFGDFTANLMVDPKKHKIKSEESDRIINQLKDKQFYLQDVIKTKT
LSKPPKPFITATLQQESFKYLGMNSRKTMIIAQKLYEGVKINQEIIGLITYMRTDSYCMS
QEFIREAKKFISEKFGSSYVNNILNNFSKNNVEAHEAIRITDIKRTPQEIKNYLTKDELS
LYNLIYQKTISSLMTAAIINKTQFIFEIEKYLFQTEGYQIIFDGYFKTTTYSNFKEILLP
DWEKHKYYLPQKVIAKSQMTSPPPRYNEASLIKNLENLKIGRPSTYSHIIETLKNRYYVE
IKEKKMICTQRGLITNEVLMKFFNSFINVKYTANMEAQLDQIANGKMDKVTILKKFYDDF
IKLFIYANDNINTIPNITTKQKCSVCGDFMVERFGKYGTFLGCNSYPKCKNSDIDQKKKK
TITITNQNCSNCGSFMVERNSKYGKFLGCSSYPKCKKIISYKKNNKKENDEKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaaaagtaattattgtagaatcgcctgccaaagctaaaactattagtagtttt
tttgatcataaaattttagttttatcttcaaaaggacatatacgcaatttatctttaaaa
ggtaaagataatttaggaattgatattaataataattttaaacctgattattgtattatt
aaaggtaaagaatctatagttcgagaattgatttctaaaactaaagataaaaaggtcttt
atagctactgatttcgatagagaaggcgaagctattgcgtggcatttatctcaagtttta
aaattaaatcctttacataaaaatagaattttttttagtgaaattaataaaaatattgtt
attaaagcttttaacaatcctgtcataattaataaacgtttagtagaatcacaagaaact
cgtttaatattggataaaattatcggttttaaattgtcatctttagtacatcgtattcgt
tctaaatcagcaggacgtgttcaatcagtagctttaaaactggttgctgaacgcgaaaaa
gaacataacgaattcattcctgaagagtattttttaattaaagctttttttggagatttt
accgctaatttaatggttgaccccaaaaaacataaaattaaatcggaagaatcggatcga
attataaatcagctcaaagataaacaattttatttacaagatgtaattaaaactaaaacc
ttaagcaaaccacctaaaccatttattacagccaccttacaacaagaatcatttaaatat
ttaggaatgaattcacgaaaaactatgataattgctcaaaaactttacgaaggtgtgaaa
ataaaccaagaaataatcggattgattacttatatgagaactgattcttattgtatgtct
caagagtttataagagaagctaaaaaatttatttctgaaaaatttggctcttcttatgtt
aataatattttaaataatttttccaaaaataacgtagaagctcatgaagctattcgtatt
actgatattaaacgaactcctcaagaaattaaaaattatttaactaaagatgaattatct
ttatataatttaatttatcaaaaaactatatctagtttaatgactgcagcaattattaac
aaaacacaatttattttcgaaatagaaaaatatttgtttcaaacagaaggttatcaaata
atatttgatggttatttcaaaacgacaacttattctaattttaaagaaatattattacct
gattgggaaaagcacaaatattatttgcctcaaaaagtgatagctaaatctcaaatgact
tcaccaccacctcgttataacgaagcctccttaattaaaaatttagaaaatttaaaaatc
ggtagaccttcaacttattctcatattattgaaactttaaaaaatagatattatgttgaa
attaaggagaaaaaaatgatttgtactcaaagagggttaattacaaatgaagttttaatg
aaattttttaattcttttattaatgttaaatatacagccaacatggaagcacaattagat
caaattgctaacggtaaaatggataaagttaccatcttaaaaaaattttacgatgatttt
attaaattatttatatatgctaatgataatattaataccatacccaatattactacaaaa
caaaaatgttctgtttgtggagatttcatggtggaacgttttggtaaatatggtactttt
ttaggttgtaattcttatcctaaatgtaaaaattcagatattgatcaaaaaaagaaaaaa
actataactataacaaatcaaaattgttctaattgtggttcttttatggtagaaagaaat
agcaaatatggtaaatttttaggttgtagttcttatccaaaatgtaaaaagattatttct
tataagaaaaataataaaaaagaaaatgatgaaaaagattaa
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