Pseudomonas phoenicis: AA0Z93_06040
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Entry
AA0Z93_06040 CDS
T11920
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pphz Pseudomonas phoenicis
Pathway
pphz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AA0Z93_06040 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphz03400
]
AA0Z93_06040 (mutM)
Enzymes [BR:
pphz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AA0Z93_06040 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AA0Z93_06040 (mutM)
DNA repair and recombination proteins [BR:
pphz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AA0Z93_06040 (mutM)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
XNQ59411
LinkDB
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Position
complement(1319089..1319901)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPFLEGQRVSRVVVRDRRLRWPIPEDLDTRLSGQRIVTVQRRAKYL
LINAEVGTLISHLGMSGNLRLVEGGSPVGKHEHVDIELESGLILRYTDPRRFGAMLWSLD
PHNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRREAGGISRARYLRLSEEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGQLCKVCGTTLREVKLGQRASVYCLRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagaagtcgaaaccacccggcgcgggatagcgccatttctcgaaggc
cagcgcgtcagccgagtggtggtgcgcgaccgccgcctgcgttggccgattcccgaagac
ctggacacacggttgtccgggcagcgcatcgtcaccgtacagcggcgcgccaaatacctg
ttgatcaacgccgaggtcggcaccctgatcagccatctgggcatgtcgggcaacctgcgg
ttggtcgagggcggctcgccggtgggtaagcacgagcatgtcgacatcgagttggagtcg
ggactgatcctgcgctacaccgacccgcgccgtttcggcgccatgctctggagcctcgac
ccgcacaaccacgagctgctgctgcgcctgggaccggagccgttgaccgacctcttcgat
ggcgagcggctgttccagctctcgcgcggccgttcgatggcggtcaagccgttcatcatg
gacaacgcggtggtagtgggggttggcaacatctatgcgagcgaggcgctgttcgcggcg
ggcatcgacccgcggcgcgaagcaggcgggatttcccgggcgcgctacttgaggctgtcg
gaagagatcaagcgtatcctggctgccgccatcgagcgcggcggcaccaccttgcgcgat
ttcatcggcggcgacggccagccgggatacttccagcaggagctgttcgtctacggacgc
ggcggccaattgtgcaaggtctgcggtacgaccctgcgcgaggtcaagctggggcagcgt
gcgagcgtgtactgcctgcgctgccagcgctga
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