Pseudomonas phoenicis: AA0Z93_07415
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Entry
AA0Z93_07415 CDS
T11920
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pphz Pseudomonas phoenicis
Pathway
pphz03420
Nucleotide excision repair
pphz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AA0Z93_07415 (uvrD)
03430 Mismatch repair
AA0Z93_07415 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphz03400
]
AA0Z93_07415 (uvrD)
Enzymes [BR:
pphz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA0Z93_07415 (uvrD)
DNA repair and recombination proteins [BR:
pphz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA0Z93_07415 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AA0Z93_07415 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
Viral_helicase1
AAA_11
DUF5681
Motif
Other DBs
NCBI-ProteinID:
XNQ59665
LinkDB
All DBs
Position
1634655..1636838
Genome browser
AA seq
727 aa
AA seq
DB search
MPNDDLSLLLNSLNDAQRQAVAAKVGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPHSI
LSVTFTNKAAAEMRQRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEARLAQNFQILDSD
DQQRLVKRVMRELGLEEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAY
ELACERAGVIDFAELLLRALDLWRDNPSLLQHYQRRFRHLLVDEFQDTNAVQYAWLRLLA
KGGDSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTGGILKAANALI
VNNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESVIKQGSKRNDIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQVSMWEAMCQLLAGKGLKGRAASALGAFIELLEQLAAKVADMPL
YLMTQTVIEQSGLIVYHQEEKGEKGQARVENLEELVSAARNFVPSAEDAELTELSAFLGH
ASLEAGDAQAEEHEDSVQLMTLHSAKGLEFPHVFLVGLEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPPGLVQEVRLSNSVSRPFGAT
ATPASSLFANASIPQTAFTLGQRVQHSVFGEGVILNFEGSGAQARVQVNFEEGSKWLMLG
YAKLEPV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacgacgacctctctctgctcctcaactccctcaacgacgcccagcgccaggcc
gtagcggccaaggtcgggcggcaactggtgctggccggtgccggctccgggaaaacccgc
gtgctagtgcatcgcatcgcctggctgatccaggtcgagcacgcctcgccgcattcgatc
ctgtcggtgaccttcaccaacaaggccgctgccgaaatgcgccagcggatcgaacagctg
atgggtatcaacccggccggcatgtgggtcggcaccttccacggcctggcccatcgcctg
ctacgcgcccattggcaggaagcgcgcctggcgcagaatttccagatcctcgacagcgac
gaccagcaacgcctggtcaagcgggtgatgcgcgaactgggcctggaagagcagaaatgg
cccgcgcgccaagcgcaatggttcatcaacgggcagaaggacgaaggcctgcgcccgcag
cacatccaagccggcggcgacctgttcctggctaccatgcgcgaggtctacaccgcctac
gaattggcctgcgagcgcgccggggtgatcgacttcgccgaactgttgctgcgcgccctc
gacctgtggcgcgacaaccccagcctgctgcagcactaccagcggcgcttccgccacttg
ctggtggacgagttccaagacaccaacgccgtgcagtacgcctggctgcgcctgctggcc
aaaggcggcgacagcctcatggcggtgggcgacgacgaccagtcgatctacggctggcgt
ggcgccaagatcgagaacatccaccagtacaccgctgacttccccgacgccgagctgatc
cgcctggagcagaactaccgctccaccggcggcatcctcaaggccgccaacgccctgatc
gtcaacaacagcggacgcctgggcaaagagctgtggaccgacatgggcgaaggcgagccg
ctgaccctgtacgccgcctacaacgagcacgacgaagcgcgctacgtggtcgagaccatc
gagagcgtcatcaagcaaggcagcaagcgtaacgacatcgccatcctctaccgttccaac
gcccagtcgcgggtgctcgaagaggcgctgctgcgcgagcgcatcccctaccgcatctac
ggtggccagcgcttcttcgagcgtgccgagatcaagaacgccatggcctacctgcgcctg
ctcgaaggccgtggcaacgatgcggccctggagcgggtgatcaacgtgccgccgcgcggc
atcggcgagaagaccgtcgaggccatccgcgaacatgcccgccacagccaggtgtcgatg
tgggaggccatgtgccaactgctcgccggcaagggcctcaagggccgcgcggccagcgct
ctgggcgccttcatcgagctgctcgagcaactggcggcgaaagtggccgacatgccgctg
tacctgatgacgcaaacggtcatcgagcagtccgggctgatcgtgtatcaccaggaagag
aaaggtgaaaagggccaggcacgggtggaaaacctcgaggaactggtcagcgcggcgcgc
aacttcgtgcccagcgccgaagacgccgaactcaccgagctgtcggccttcctcggccat
gcgtcgctggaagccggcgacgcccaggccgaagagcacgaagacagcgtgcagctgatg
accctgcacagcgccaagggcctggagttcccccatgtgttcctggtgggcctggaagaa
ggcctgttcccgcacaagatgagcctggaagaaccggggcgtctggaagaggagcgtcgt
ctggcctacgtgggcatcacccgggccatgcgccaactggtgatgacctatgccgagacc
cgccggttgtatggcagcgaaacctacaacaaggtgtcgcgtttcgtacgcgagatcccg
cctgggctggtgcaggaagtgcgcctgtcgaactcggtcagccggcccttcggcgccacc
gccacgccggccagcagcctgttcgccaacgccagcattccgcagaccgctttcaccctg
ggtcagcgcgtgcagcattcggtgttcggcgagggcgtcatcctcaacttcgaaggttcc
ggtgcccaggcgcgggtgcaggtcaacttcgaagaaggcagcaaatggctgatgttgggc
tacgccaagctcgagccggtctga
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