Pseudomonas putida ND6: YSA_00185
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Entry
YSA_00185 CDS
T02170
Name
(GenBank) GGDEF domain-containing protein
KO
K21023
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
YSA_00185
Enzymes [BR:
ppi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
YSA_00185
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
MHYT
GGDEF
Peptidase_U4
GGDEF_2
DUF6463
Motif
Other DBs
NCBI-ProteinID:
AFK66876
UniProt:
I3UN05
LinkDB
All DBs
Position
complement(90846..92933)
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AA seq
695 aa
AA seq
DB search
MLTGSYSSSLVLISLCVAILASYTALDLTGRIATAKGRAACLWMGGGALAMGIGVWSMHF
IGMLAFSLPIDLGYDLALTAFSLLIAVLSSGFALWLVSQPSLPALQLGFGALIMGAGIAC
MHYTGMAALRMLPGIDYDPTLFGASLLIAVGASAAALWIAFRLRRHTPYVRQIRGLAAVV
MGVAIVGMHYTGMAAANFPEGSFCGALGGGLQGDSLVYLVLITTLAVLAVALLTSVLDAR
LEARTAELARSLTLANQELTQLALHDTLTDLPNRTLLADRIEQAIAKVAEQGGCFALMFI
DLDGFKPVNDAFGHHIGDLLLKAVAARLRGHLHSQDTLARIGGDEFVLLVELQEPNDAMD
VAVKQVNLVSRPFRVAEHDLQLSASLGIVLYPGNGQDQHELLRNADAAMYHAKSAGKNGY
SFFDVSMNSNARQQLQLLQDLRLALEQRQFRLHYQPKFDAQACQPIGAEALLRWEHPQQG
LLLPDRFIGLAEKTGLIIPIGEWVLTEACRQMRQWLDQGHHGWRMAVNLSAIQFCHAGLV
DSVARALQQNGLPANCLTLEITETTAMHDADASLTVLQRLSDMGVDLSIDDFGTGYSSLM
YLKRLPANELKIDRGFVRDLEQDSDDAAIVSAIVALGQALGLRIVAEGVETDKQQDFLTR
LGCDSLQGYLLGQPVPAEQFMSKLQAMGPELTAAG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccggtagctactcctcttcgctggtgttgatttcgctgtgcgtggcgatcctg
gcatcctataccgcccttgacctgaccggccgcattgccacggccaagggccgcgctgcc
tgcctgtggatgggcggtggtgcgttggccatgggcatcggcgtgtggtcgatgcacttc
attggcatgcttgccttcagcttgcccattgacttggggtacgacctggccctgaccgcg
ttctcgttgctgatcgctgtgctgtcctcgggctttgccttgtggctggtcagccagccg
agcctgccagcgctgcagttggggtttggcgcgctgatcatgggcgccggtatcgcttgc
atgcactacaccggcatggctgccctgcgcatgctgccgggcatcgattacgacccgacg
ttgttcggcgcttcgctgctgattgccgtaggcgcctcggcggcggcattgtggattgcc
ttccgcctgcgcagacacaccccctatgtacggcagatccgcggcctggcggcggtggtc
atgggcgttgccatcgtgggcatgcattacaccggcatggcagcggcgaacttccccgag
ggcagcttctgcggcgcgctggggggcgggttgcagggggacagcctggtttatctggtg
ctgatcaccacgctggcagtactggcagtggcattgctgacttcggtgctggacgcgcgt
ctcgaggcacgtacagccgagttggcccgttcgctgaccttggccaaccaggaactgacc
caactggccttgcacgacaccctcaccgatctgcccaaccgtaccctgctggccgatcgc
atcgaacaggccatcgccaaagtggcggagcagggtggttgttttgccctgatgttcatt
gatctggacggcttcaaacccgtcaacgatgcctttggccatcatatcggtgaccttctg
ctcaaagcggtagcggcccgcttgcgcggccacctgcacagccaggacacgctggcacgg
attggcggcgacgaattcgtgctgctggtggaactgcaggagccgaacgatgccatggac
gtggcggtcaagcaggtcaacctggtgtcccggcctttccgcgtggccgagcacgacctg
caactgtcggcgagcctgggcatcgttctgtacccgggcaacggccaggaccagcatgag
ctgctgcgtaacgccgacgctgccatgtaccatgccaagagcgccggcaagaacggttac
agcttcttcgatgtgtcgatgaacagcaacgcgcgccagcagttgcagctgctgcaggac
ttgcgcctggcgcttgagcagcgccagttccgcttgcattatcagcccaagttcgacgcc
caggcctgccagccgatcggtgccgaagcgttgctgcgctgggagcacccgcagcagggc
ctgctgctgcctgaccgcttcatcggcctggcggaaaagactggcctgatcatccccatt
ggtgagtgggtactcactgaggcctgccgtcagatgcgtcagtggctggatcaggggcac
catggctggcgcatggcggtgaacctgtcggccatccagttctgccatgccggtctggtc
gacagcgtggcccgcgccctgcagcagaacggcttgccagccaactgcctgacactggaa
attaccgaaaccaccgccatgcacgatgccgacgccagcctgaccgtgctgcagcgcctg
tccgacatgggcgtggacttgtccattgatgactttggtacgggctattccagcctgatg
tacctcaaacgcctgccagccaacgagctgaaaatcgaccgcggtttcgtacgcgacctg
gagcaggacagtgacgatgcagcgattgtttcggcaattgtcgcactgggccaggcgtta
ggcctgcgtatcgttgccgagggggttgaaaccgacaaacagcaggacttcctgacccgt
ctggggtgtgattcgttgcagggctacctgctgggccagcccgtgccggccgagcagttt
atgagcaagttgcaggccatgggcccggaactcactgctgcgggctag
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