Pseudomonas putida ND6: YSA_00216
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Entry
YSA_00216 CDS
T02170
Name
(GenBank) FAD dependent oxidoreductase
KO
K26064
D-lysine oxidase
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00310
Lysine degradation
ppi01100
Metabolic pathways
ppi01120
Microbial metabolism in diverse environments
Module
ppi_M00960
Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
YSA_00216
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Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_binding_2
NAD_binding_8
FAD_binding_3
ApbA
UDPG_MGDP_dh_N
TrkA_N
Pyr_redox_2
MurD-like_N
HI0933_like
Pyr_redox
3HCDH_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AFK66892
UniProt:
I3UN21
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Position
112044..113288
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AA seq
414 aa
AA seq
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MHCQTLVLGAGIVGVSTALHLQARGRQVILIDRDEPGSGTSHGNAGLIERSSVIPYAFPR
QLGALLRYGLNRQPDVRYSLAHLPKAAPWLWRYWRQSAPGRLAGAAADMLPLVQRCVDEH
DALIAAAGLEGLVQAKGWIEVFRDPALFEQAKTDAKGLSRYGLRFEILECGQLQAREHQL
DATVVGGIHWLDPKTVNNPGALTRGYAALFLQRGGQFVHGDARSLRQANGQWRVESQRGP
ITADEVVACLGPQSADLFSGLGYQIPLAIKRGYHMHYSTRDGAQLEHSICDTQGGYVLAP
MARGVRLTTGIEFDAASAPGNQIQLGRCEALARKLFPALGDRLDDTPWLGRRPCLPDMRP
VIGPAPRHPGLWFNFGHAHHGLTLGPVCGRLLAELLTGEPPFTDPAPYSATRFD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcattgccagacccttgtcctcggcgccggcatcgtcggcgtcagcaccgcgctgcac
ctacaggcacgcgggcgccaggtaattctgatcgaccgcgacgaaccgggcagcggcacc
agccacggtaacgccgggctgatcgagcgctccagtgtcatcccctatgccttcccgcgg
caactcggcgcactgctgcgctacggcctgaaccgccagcccgatgtgcgctacagcctg
gcgcacctgcccaaggccgcaccgtggctgtggcgttactggcgccagtcggcacccggg
cgcctggccggcgccgccgccgatatgttgccgctggtgcagcgctgtgtcgacgagcat
gacgcgctgatcgctgccgccggcctggagggcctggtgcaagccaaaggctggatcgaa
gtgttccgcgaccccgcgctgttcgagcaggcaaaaaccgatgccaagggcctgagccgc
tacggcttgcggttcgaaatccttgaatgcgggcagctgcaggcacgtgaacatcagctg
gacgccaccgtggtcggtggcatccactggctcgacccgaaaaccgtgaacaaccccggc
gcgctcacccgtggctatgcggcgctgttcctgcagcgcggcgggcagttcgtgcatggc
gatgcgcgcagcctgcgccaggccaatggccaatggcgggtagagagccagcgtggcccg
atcactgccgacgaggtggtggcctgccttgggcctcagtcagccgacctgttcagcggc
ctgggctaccagatcccgctggccatcaagcggggctaccacatgcactacagcacccgt
gacggcgctcagctggagcactcgatctgcgacacccaaggcggctatgtactggcgccg
atggcgcgcggcgtgcgcctgaccaccggcatcgagttcgacgcagccagcgcgcctggc
aatcagattcagctgggccgctgcgaggccttggcgcgcaagctgttcccggccctcggc
gatcgtctggacgacacgccatggctgggccgccgcccctgcctgcccgacatgcgcccg
gtgatcgggccggcgccgcgccacccagggctgtggttcaacttcggccatgcccatcac
ggcctcacgctgggcccggtctgcggccggctgctggccgagctgctcactggcgagccc
cccttcaccgaccccgcgccttacagcgcgacccgtttcgactga
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