KEGG   Pseudomonas putida ND6: YSA_00341
Entry
YSA_00341         CDS       T02170                                 
Name
(GenBank) hypothetical protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    YSA_00341
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppi02044]
    YSA_00341
Secretion system [BR:ppi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YSA_00341
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AFK66960
UniProt: I3UN89
LinkDB
Position
182396..183733
AA seq 445 aa
MSSRNPVLWPEGLFVKPQHFQQATRASEAALHQRLASLNAAFYGFSELQLSDEYLSLGKV
AITRARGVMPDGTVFDIPADLPPPPPLEIGDDACQDSEVYLCLPLRTDGGREVSWPDNAA
NFRYTAQAQEIKDTHTADGDLVQVDLAVPNLQLKRKTEDSSAYTRLALARILERRPDGSL
QLDEAFYPTSVSVRAVPALQRFLEEITHTLRERARGLATRIGASGQSGIADIRDFNLLQA
MNRWWPCFQHLARQAQTHPEQLYLCMSQACGEFVTFTDQNRLPQEYPAYHHTALRTSFKP
LEDTLRRSLSTVLRPRAVSLPLESEQFGVMTTTLEDRRLIDEADFILAVRASMPPQALRQ
MFIQKAKITSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMSK
ANGFGIHIAGDFPGLELQFWAIRSE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagttcacgcaatcccgttctctggcccgaaggcctgttcgtcaaaccacagcatttc
cagcaggcgaccagggccagcgaagcagccctgcaccagcgcctcgccagcctcaacgca
gccttctacggcttcagcgaacttcagttgagcgacgaatacctgagcctgggcaaagtc
gccatcacccgggcgcgcggtgtgatgccggacggcacggtgttcgacattcccgccgac
ctgccgccaccgccgccgctggaaatcggcgacgacgcgtgccaagacagtgaggtgtat
ctgtgcctgccgctgcgtaccgatggcggccgcgaagtgagttggcccgacaatgcagcc
aatttccgctataccgcccaggcacaggaaatcaaggatacccacaccgctgacggcgac
ctggtgcaggtagaccttgcggtgcccaacctgcagctcaaacgcaagaccgaagacagc
agcgcctacacccgcctggccctggcacgtattctggaacggcgccccgacggcagcctg
caactggacgaagcgttctaccccaccagcgtttcggtgcgggcggtgccagcgctgcag
cggtttcttgaagaaatcacccataccttgcgcgagcgggcgcgcggcctcgccacgcgg
attggtgcatcgggccagtccgggatcgccgacattcgcgacttcaacctgctgcaggca
atgaaccgttggtggccatgcttccagcatctggccaggcaagcgcaaacgcaccccgag
cagctgtacctgtgcatgagccaggcctgcggcgaattcgtcaccttcaccgaccagaac
aggctcccgcaggagtaccccgcctatcaccacaccgcgctgcgcacctctttcaaacca
ctggaagacaccttgcgtcggtctctgagcaccgtcttgcggccacgcgctgtttcacta
ccgctggagagcgaacaattcggtgtgatgacaaccacgctggaagaccgccggctgatc
gacgaagccgacttcatcctcgccgtgcgcgccagcatgccaccacaggcgttgcgccag
atgttcatccagaaagccaagatcacctcacttgagtcactgaatgacctggtgccgctg
caattgccgggcatccctttgttgccattacccgtggcgccccgcgacctgcccttccat
gcaggcttcagctacttcgagctggaccgacgtgacccggcctgggcgtgcatgagcaag
gcgaatggcttcggcatccacattgcgggcgacttcccagggcttgaactgcagttctgg
gcgatcaggagtgagtga

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