Pseudomonas putida ND6: YSA_00341
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Entry
YSA_00341 CDS
T02170
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
YSA_00341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppi02044
]
YSA_00341
Secretion system [BR:
ppi02044
]
Type VI secretion system
Imp/Vas secretion system core components
YSA_00341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AFK66960
UniProt:
I3UN89
LinkDB
All DBs
Position
182396..183733
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AA seq
445 aa
AA seq
DB search
MSSRNPVLWPEGLFVKPQHFQQATRASEAALHQRLASLNAAFYGFSELQLSDEYLSLGKV
AITRARGVMPDGTVFDIPADLPPPPPLEIGDDACQDSEVYLCLPLRTDGGREVSWPDNAA
NFRYTAQAQEIKDTHTADGDLVQVDLAVPNLQLKRKTEDSSAYTRLALARILERRPDGSL
QLDEAFYPTSVSVRAVPALQRFLEEITHTLRERARGLATRIGASGQSGIADIRDFNLLQA
MNRWWPCFQHLARQAQTHPEQLYLCMSQACGEFVTFTDQNRLPQEYPAYHHTALRTSFKP
LEDTLRRSLSTVLRPRAVSLPLESEQFGVMTTTLEDRRLIDEADFILAVRASMPPQALRQ
MFIQKAKITSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMSK
ANGFGIHIAGDFPGLELQFWAIRSE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgcaatcccgttctctggcccgaaggcctgttcgtcaaaccacagcatttc
cagcaggcgaccagggccagcgaagcagccctgcaccagcgcctcgccagcctcaacgca
gccttctacggcttcagcgaacttcagttgagcgacgaatacctgagcctgggcaaagtc
gccatcacccgggcgcgcggtgtgatgccggacggcacggtgttcgacattcccgccgac
ctgccgccaccgccgccgctggaaatcggcgacgacgcgtgccaagacagtgaggtgtat
ctgtgcctgccgctgcgtaccgatggcggccgcgaagtgagttggcccgacaatgcagcc
aatttccgctataccgcccaggcacaggaaatcaaggatacccacaccgctgacggcgac
ctggtgcaggtagaccttgcggtgcccaacctgcagctcaaacgcaagaccgaagacagc
agcgcctacacccgcctggccctggcacgtattctggaacggcgccccgacggcagcctg
caactggacgaagcgttctaccccaccagcgtttcggtgcgggcggtgccagcgctgcag
cggtttcttgaagaaatcacccataccttgcgcgagcgggcgcgcggcctcgccacgcgg
attggtgcatcgggccagtccgggatcgccgacattcgcgacttcaacctgctgcaggca
atgaaccgttggtggccatgcttccagcatctggccaggcaagcgcaaacgcaccccgag
cagctgtacctgtgcatgagccaggcctgcggcgaattcgtcaccttcaccgaccagaac
aggctcccgcaggagtaccccgcctatcaccacaccgcgctgcgcacctctttcaaacca
ctggaagacaccttgcgtcggtctctgagcaccgtcttgcggccacgcgctgtttcacta
ccgctggagagcgaacaattcggtgtgatgacaaccacgctggaagaccgccggctgatc
gacgaagccgacttcatcctcgccgtgcgcgccagcatgccaccacaggcgttgcgccag
atgttcatccagaaagccaagatcacctcacttgagtcactgaatgacctggtgccgctg
caattgccgggcatccctttgttgccattacccgtggcgccccgcgacctgcccttccat
gcaggcttcagctacttcgagctggaccgacgtgacccggcctgggcgtgcatgagcaag
gcgaatggcttcggcatccacattgcgggcgacttcccagggcttgaactgcagttctgg
gcgatcaggagtgagtga
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