Pseudomonas putida ND6: YSA_00537
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Entry
YSA_00537 CDS
T02170
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppi03000
]
YSA_00537
Transcription factors [BR:
ppi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
YSA_00537
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AFK67066
UniProt:
I3UNJ5
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All DBs
Position
complement(305193..306386)
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AA seq
397 aa
AA seq
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MIDVELPNLMQVRAFIRVAELGSVSRATEVLFRAQSVVTRAIAELEARFAVPLFERHANG
MRLTDYGECLLPRAQRVLAELDGVPSLLGTAQGEPLYLFQARRLQVFVKLCETRHMQTVA
RHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASRDILFPIRRALNELRLLDSDL
SAMQGTLRGVVHVGALPLGRSRILPDAILRFTAQHPQVRVVTNESPFDLLATELRVGDVD
FVLGALRPHDYASDLVGEPLINEEMVVLARRGHPLLHTHLTLKDVHQARWVLPRAGSPAR
QLLDNCFAAAGLTAPWPVVESADLAVIRGLLVRSDMLAAVSAHQLAYEIASGELQRLPLA
LPGTARAIGLMQRSGCLQSPAAVALMACIRQVITEQA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgtcgaactgcccaacctgatgcaagtccgcgcgttcatccgggtagccgag
ctgggcagcgtttcgcgggcgacggaggtgttgttccgtgctcagtccgtggtcactcgc
gccatcgccgagctggaggcgcgctttgccgtgcccctgttcgagcgccatgccaatggc
atgcgcctgaccgactatggcgagtgcctgctgccgcgtgcacagcgcgtgctggcggaa
ctggacggcgtgccgagtttgctgggcaccgcgcagggcgagcccctctacctgtttcag
gcgcggcgcctgcaggtgttcgtgaagctctgtgaaacacggcacatgcaaaccgtggcg
cggcacttcggccttagccagccggcggtcagtgcggccttgaaagtgctcgaaggcggg
tgcggacagcccttgttcgtgcgcacgtcgcgcggcctgcagcccactgtggccagccgg
gacattctgttccccatccgccgggcgctgaacgagttgcgcctgctggacagtgacctg
agcgcgatgcaaggcaccctgcgcggggtggtgcatgtcggcgcgttgccattgggccgc
tcgcgcattctaccggacgccattttacgcttcacggcccagcacccacaggttcgggtg
gtgaccaacgaaagcccgttcgacctgctggcaaccgagctgcgggtaggggatgtggat
ttcgtcttgggcgccttgcggcctcacgattatgccagcgacctggtgggcgagccgctc
atcaacgaggaaatggtggtgctggcccgtcgagggcacccgctgttgcacacacacctg
acgctcaaggacgtgcaccaggcgcgctgggtgttgccgcgggccggttcgccggcccgc
cagctgctcgacaactgtttcgccgccgcgggcctgacagcgccgtggccggttgtggaa
agcgctgatctggcggttatccgtggcctgctggtgcgttcggacatgctggcggcggtg
tctgcgcaccagttggcttacgagattgccagcggcgaactgcaacgcctgccgctggca
ctgcccggcactgcccgcgccatcggcctcatgcagcgcagtggctgcctgcagtcaccg
gcggcagtcgcgctgatggcctgtatccgccaggttatcaccgagcaggcgtga
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