Pseudomonas putida ND6: YSA_00901
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Entry
YSA_00901 CDS
T02170
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YSA_00901
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppi01007
]
YSA_00901
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppi03016
]
YSA_00901
Enzymes [BR:
ppi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
YSA_00901
Amino acid related enzymes [BR:
ppi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
YSA_00901
Transfer RNA biogenesis [BR:
ppi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
YSA_00901
Prokaryotic type
YSA_00901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AFK67263
UniProt:
I3UP42
LinkDB
All DBs
Position
complement(444579..446960)
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AA seq
793 aa
AA seq
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MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILATEQHPDAD
KLRVCQVSSGQETFQVVCGAPNARPGIKIPFAMIGAELPGDFKIKKAKLRGVESFGMLCS
AAELQISEENDGLLELAADAPVGEDIRTYLSLDDASIEIGLTPNRGDCLSIAGLARDVSA
LYDTPVTRPVVPAVAAAHDEVRPVEVSAPAACPRYLGRVIRNVDLSKPTPLWMVERLRRS
DVRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVALRADT
LVIADHTRALAIAGVMGGEHSGVNTEKTRDLFLESAFFEPISVAGKARSYGLHTDASHRY
ERGVDSQLAREAMERATQLLLDIVGGEAGPVVEAVSEQHLPQVAPVTLRAERITQMLGME
MDPAQVEQLLNALELTTTKSGEGQWTVSVPSHRFDISLEVDLIEELARLHGYNNLPVRYP
QARLAPQGKPETRGDLPTLRRLLVARGYQEAITYSFIDPKLFELFSPGVEPLLLANPISS
DMAAMRASLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQLGDLQQQPMIAGVITGSRLP
EGWANGRDGVDFFDVKADVEALLGYSGALSDFTFSAGKHPALHPGQTAAIERDGKLVGYL
GAIHPELAKALGLDRPVFLFELVLGDVVEGRLPKFSELSKFPETRRDLALIAGRDVASSA
VLELIRDNAGEWLTDLRLFDVYQGKGIDPDRKSLAVGLTWQHPSRTLNDDEVNTTLQNIL
TSLEQRLNTTLRK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaacagtggctgcgcggttgggtcaacccgcaagtctcccgtgacgaa
ctggtcgcccgcctgtccatggccggcctcgaagttgacagcgttacccccgctgccggc
cagttcagcggcatcgtcgtgggcgaaattctcgccaccgaacaacacccggacgccgac
aagttgcgcgtgtgccaggtaagcagcggccaggaaaccttccaggttgtgtgcggcgcc
cctaacgcccgcccaggcatcaagatcccgttcgccatgatcggtgccgaactgccaggc
gacttcaagatcaagaaggccaagctgcgcggtgtcgagtccttcggcatgctgtgctcg
gctgccgaactgcagatcagcgaagaaaacgacggcctgctggaactggctgccgacgct
ccggttggcgaagacattcgcacgtacctgagcctggatgatgccagcatcgaaatcggc
ctgaccccgaaccgcggcgactgcctgtccatcgccggcctggcacgcgacgtcagcgcc
ctgtacgacaccccggtcacccgcccggtggtgccagccgtagcggccgcccatgacgaa
gtgcgcccggtcgaagtcagcgccccggctgcctgcccgcgctacctgggccgcgttatc
cgtaacgtcgacctgagcaagccaaccccactgtggatggtcgagcgcctgcgccgcagc
gacgttcgcagcatcgacgccgccgtcgacatcaccaactacgtgatgctcgaactcggc
cagccgatgcatgccttcgacctggcggaaatcaacggcggcatccgcgtgcgcatggcc
gaagagggcgaaaaactcgtcctgctcgacggccaggaagtggccctgcgtgctgacacc
ctggtcatcgccgaccacacccgcgccttggccatcgccggcgtcatggggggcgagcac
agcggtgtgaacaccgaaaaaacccgcgacctgttcctggaaagcgccttcttcgagccg
atttccgtcgccggtaaagcccgttcctacggcctgcacaccgatgcctcgcaccgctac
gagcgcggcgtcgactcgcaactggcccgcgaagccatggagcgcgccacgcagttgctg
ctggacatcgttggcggcgaagccggccctgtggtcgaagcggtcagcgaacagcacctg
ccacaagtagccccggtcaccctgcgcgccgaacgcatcacccagatgcttggcatggaa
atggacccagcccaggtcgagcagttgctcaacgccctcgagctgaccacgaccaagagc
ggggaagggcagtggaccgtcagcgtaccaagccaccgcttcgacatcagcctggaagtg
gacctgatcgaagagctggcccgcctgcacggctacaacaacctgccggttcgttacccg
caagcccgcctggccccacagggcaagccggaaacccgcggtgacctgccgaccctgcgc
cgcctgctggttgcccgcggctaccaggaagccatcacctacagcttcatcgacccgaaa
ctgttcgaactgttcagcccgggcgtagagccgctgctgctggccaaccccatctccagc
gacatggccgccatgcgcgcctcgctgtggccgggcctggtcaaggcactgcagcacaac
ctgaaccgccagcaagaccgcgtgcgcctgttcgaaagcggcctgcgctttgtcggccaa
ctgggtgacctgcagcagcagccaatgattgccggcgtcatcaccggcagccgcctgcca
gaaggctgggccaacggccgcgacggcgtcgacttcttcgacgtgaaagccgacgtggaa
gccctgctgggctactccggcgccctgagcgacttcaccttcagcgccggcaaacaccca
gccctgcacccaggccagactgctgccatcgagcgtgacggcaaactggtcggctacctc
ggcgccatccacccagagctggccaaggccctgggcctggaccgcccggtgttcctgttc
gagctggtgctgggcgacgtggtcgaaggccgcctgccgaaattcagcgaactgtccaag
ttcccggaaacccgtcgtgacctggctttgatcgcaggacgtgatgtggcttctagcgcg
gtgcttgaattaattcgtgacaatgcaggcgaatggctcacagacctcaggctgtttgat
gtgtaccaaggtaaaggcattgatcctgatagaaaaagccttgccgtcggcttgacctgg
cagcatccatcgcgcactcttaacgacgatgaggtgaacactaccctgcaaaacatcctc
acctcgctcgaacaaaggttgaacaccacgttaaggaaataa
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