Pseudomonas putida ND6: YSA_01094
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Entry
YSA_01094 CDS
T02170
Name
(GenBank) leucine-rich repeat-containing protein
Organism
ppi
Pseudomonas putida ND6
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Ortholog
Paralog
GFIT
Motif
Pfam:
NEL
ToxA_N
LRR_4
LRR_8
LRR_14
LRR_LRWD1
DUF928
LRR_9
Motif
Other DBs
NCBI-ProteinID:
AFK67373
UniProt:
I3UPF2
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All DBs
Position
complement(556576..560763)
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AA seq
1395 aa
AA seq
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MTPSVIPADSIDALIARQLPGWLKRASAQELTGLRAAALRQQRAQDHVDAWLGAITPLDE
FAESLLKRAPEARSIKQVDLRQAQLRLVTLQPKPSISPALPSTSTRIVSTQTLLSAALHN
FHEREMQPGWFAAGSQLVTASGHLLPLSAQAFVRLCRDIDIGRRYQSHLQSKLEGEGVAV
ESALEEAMSANLALAAIAARIKGEIDEQTCQWINQVVGTGSFLPADNTVLKCHTLRLLGK
EVIGALVIEVRQNARLLGVIAWFPEDPYAPVSWHTSWELLYMTLGIRLRNEAYRRYFQRF
VAERDRVAFCAALNALLSHGNTVLPLELDGRCFAIEGDVFVALRQARIDKMLDDARVLAV
STEDEDVADRRARLQGYLDLGLSVAGLAALFVPVLGQALLGLTVVQLAGEVYEGYQDWQL
GDRDAALGHLFNVADTVVMTAVTTAGATALGKLAQRVAQVDALVPVSLGDGQLRLCDPSL
SGYQREGVDLMVGQAVNETGRSLRRLHDAVYEVSEGDDGAWRIHHPSRPQAYVPALEHNG
AGGWVHEFEQPQRWHDAAYMVRRLASRTAQVPDEAVSVALQATGFEADSLRRLLLENAPP
PARLLDAIERQQLHRDFPALRGEAFEELFNERQISPQAADRVLMRDFPGLSHRCAREIVE
GASSAEMESLTGASRVPLALAERARWAIRDSRIDRACAGLRQAAAENDDTGKLALGLLDA
IAPWSAGVNVELPAAGRGGLLQTLRRQLDSRQRQLLGISQMRDDALGERLGREALADREA
AARMIGLARVGQGIRPPVRLFDGRLGYPLSGHLTGTRQALRRTLNHVFPVMSSEQLEVYL
QDLAQRGVDPWDHVSQLLQAKVSLKQALQAWRNDAGLNIVRRLRRIKVARRITASWQRFT
PGEVAGDYHLTLVGERVGDLPALPENVSFDHITHLTLRDMQLTSLDAGFLGRFGKVRNLD
LRNNRLTRLPAGIEQLTELKNLRLGGNQIVLSSEDNLRLSQLVELRRLELNGNPVGLLPP
LASFPLLRRLSLRNTGLGELPADLARHGNLELLDMRDNQIQTLPEALSLVPLRLWRGLEL
HDNPLSDETLQRLQLARASAGAAERRRVAHATAIPNAAAPWLSGFTPAQREVRLASWNRL
NQEAGAQDLFRFFSDLRDLREYDAQPRDLQARVWHILEACEQHAEVRASLFEQVARPRSC
SDELLLTLSELEVGALVAKAGTAGTGLQKERALVRLGRSLFRLDKVNAIAARHIADYFSN
DPVEVYLTYRVRLADSLDLPVQPSHLSYESFSGVGREDLDAARSEVLRQETPQALAQALA
DRSFWQDYLHEQQAARFSRLDEPFQQRLDVLLEQSKTLSDGDYFAQVEHICAAREVAKRQ
LLLELSREAIQRHGL
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaccccttcagtaatacccgccgattccatcgatgcgctgattgcccgtcagttgcca
ggctggctcaagcgcgcatctgcccaagagctgacaggcctgcgcgccgctgctttgcgc
caacagcgggcgcaggaccacgtcgacgcctggttaggggctataacccccttggatgag
ttcgccgagtcgttgctcaaacgtgcgcccgaggctcgttcgatcaagcaggtagacctg
cgccaggctcagctcaggctggtgaccctgcagccaaaaccgtcgatatcacctgcttta
ccaagcacgtcaacacgcatcgtcagcacccagacgcttctctcggcggcactgcataac
ttccacgaaagggaaatgcagcctggctggttcgcggccgggtcgcagttggtcactgcc
agcgggcacctgctgccgctaagtgcgcaagcttttgtccgcctttgcagagacatcgat
attggcaggcgttatcaaagccatttgcaatcgaagctggaaggcgagggggtggccgtc
gagagtgccctggaggaggcgatgagcgccaacctggcgcttgctgcaattgccgcaaga
atcaagggtgaaatcgatgagcagacctgtcagtggatcaaccaggtggtgggcacaggg
tctttcctgccagccgacaacaccgtattgaagtgtcacaccctgcggctgttgggcaag
gaggtcattggcgcactggtgatcgaagtgcgtcagaacgcccgcctgcttggtgttatc
gcgtggttccctgaggacccgtatgccccggtgagttggcacaccagctgggagctgctg
tacatgacccttggcatacgtttgcgtaatgaagcgtatcggcgctacttccagcgcttc
gtcgcagagcgtgatcgcgtcgccttctgcgcggcgctgaacgcgctgctcagccacggt
aataccgttctcccgcttgagctggatggccgctgttttgcgatcgagggcgacgtgttt
gtcgcgctgcgccaagcccggatcgacaaaatgctggatgacgcacgggtattggcggta
tcgacagaggatgaggatgtcgccgaccgtcgcgcacgtttgcagggctatctggatttg
gggttgagcgtggcaggcctggcagcgctgtttgtgcctgtgttggggcaggccctgctg
gggcttacggtggtgcagctggcaggtgaggtgtacgaaggctaccaggattggcagttg
ggtgatcgcgacgccgcgttgggccacttgttcaacgtggccgacacggttgtgatgacg
gcggtgacgacggccggggcgacggcacttggcaagctggcccagcgagtggcgcaggtg
gatgccttggtgccggtaagcctgggcgatggccagttgcggctctgtgacccgtccttg
tcggggtatcagcgtgagggcgtcgatctgatggtaggacaggccgtgaatgaaactggc
cgttcgctgaggcgcctgcacgatgctgtctatgaggtgagtgaaggggacgatggcgca
tggcgtattcaccatccatcaaggccacaggcctacgtaccggcacttgagcacaatggt
gccgggggatgggtgcatgagttcgaacaaccgcagcgctggcatgacgccgcctacatg
gtgcgccgccttgccagtcgtacggcgcaggtgcccgatgaggcggtgtctgtggcgttg
caggccacgggtttcgaggctgacagcctgcgccgtttgttactggaaaatgcgcccccg
ccggcacgcttgctcgatgccatcgagcgccagcaattgcaccgtgatttcccggcgttg
cgaggtgaggctttcgaggagctcttcaacgagcgacagatcagcccgcaagcagcagac
cgggtcttgatgcgggacttcccaggcctttcccaccgctgcgcacgggaaatcgtcgag
ggggccagcagtgccgagatggagagcctgacgggcgcaagccgggtgcccttggccttg
gcggaacgtgcacgctgggcaatacgcgacagtcggatagaccgtgcctgcgcagggttg
cgccaggccgcggcagaaaatgacgataccggtaagctcgcgctgggcctgctcgatgcc
atcgccccctggtcggctggggtcaacgttgagctgcctgccgcgggcaggggtgggttg
ctgcagacgttgagacggcaactggacagccggcagcgacaattgcttggtattagccag
atgagggatgacgcactgggtgagcggcttgggcgtgaggcactcgctgaccgtgaagcg
gcggctcgaatgattgggctggcccgtgtggggcaggggattcgccctcctgtgcggttg
ttcgatgggcgtttgggctacccgctcagtggccacctgacaggcacccgccaggcactg
cggcgcacgttgaaccacgtgttcccggtgatgagcagtgagcagctggaggtctacctg
caagacctggcacagcggggggtggacccgtgggaccatgtcagccaactgttacaggcc
aaggtcagcctcaagcaggcattgcaagcctggcgaaatgacgcagggctgaacattgtt
cgccgcctgcgtcgtatcaaggttgccaggcgcattacggcaagctggcagcgctttacc
cctggggaggtggcgggtgactaccacctgaccctcgtgggtgagcgggtgggtgacctg
ccggctttgcctgaaaatgtgagttttgaccacatcacgcacctgaccctgcgcgatatg
cagctgacgagccttgatgcgggctttcttggtcgcttcggcaaggtgcgcaacctggac
ttgcggaacaaccggctgacacgcctacctgcaggtatcgagcaactgaccgaattgaaa
aacctgcgccttggcggcaaccagatcgtgctttccagcgaggataacctgcgtttgagc
cagcttgtggaactgcgccgcctggagctcaacggcaacccggtcggtttgctgccaccc
ttggcgtctttccccctgctgcgccggctgtccttgcgcaacaccgggctgggcgaactg
cccgctgatctggccaggcacggtaatctggagttgctggacatgcgtgacaaccagatc
cagacgctgcctgaagcgttgtctttagtgccgcttcgcctgtggcggggcctggagctg
cacgacaatccactctcggacgaaaccctgcagcgtttgcagttggccagggcgtcggcc
ggggccgctgagcggcgacgtgtagctcatgccactgcgatcccgaatgctgcagcccct
tggttgtcaggattcacgccggcccagcgcgaggtgcgattggcgagctggaaccgcttg
aaccaggaagccggggcgcaggatctgttccgctttttctctgatttacgcgacctgcgt
gaatacgacgcacaaccgcgcgaccttcaggcgcgggtgtggcatatcctcgaagcctgc
gagcagcacgctgaagtacgggcgagcctgttcgagcaagttgcccgaccgcgcagttgc
agcgacgagttgctgctgacgcttagcgagctggaggttggcgcgctggtcgccaaggcc
ggtacagccggtaccgggttacagaaggagcgggcgctggtcaggctggggcgttcgttg
ttccgcctggacaaagtcaatgcaattgccgcgcggcatattgcggattacttttcgaac
gatcccgttgaggtttacctgacctatcgcgtcaggctggcggatagcctcgaccttccc
gtgcagcccagccatctttcgtatgagagtttcagcggggttggccgcgaagacctggac
gccgcgcgcagcgaggtgctgcggcaggaaacgccacaagcgttggcgcaggcgctggca
gatcgatccttctggcaggactacctgcacgagcagcaggcggcgcgcttcagccgcttg
gacgagccttttcagcagcgcctggatgtgttgctggaacaatcgaaaacgctgagcgat
ggcgactattttgcccaggtcgagcatatctgcgcagcgcgtgaggtcgcgaaacggcag
cttttgcttgaattgagccgagaggcaattcaacgccacggcctatga
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