Pseudomonas putida ND6: YSA_01736
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Entry
YSA_01736 CDS
T02170
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_01736
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YSA_01736
Archaeal homologous recombinant proteins
YSA_01736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFK67718
UniProt:
I3UQE7
LinkDB
All DBs
Position
922012..923250
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLGDDYLQGITQVHQQLIAAALKKRKKD
QALIAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNREER
IRYSGSPIPLSFAEINYPHQVLEVELDGNGLVSVEPRPVPRAVALQRVGPAPLGELLQQL
ADLPVIDLLEDPNRQPWLEVRVMLDEPQPDLRQQIETALEGKAVRLIRISAEYAGRNNAE
DDDLAFVELAQMTPQDLFSRAWEQAYGNPADEQALADFALLLQDVQQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcatacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctcggccagctgcgcctgcgccagccg
gatgcgctgctgattgcgggcgacatcttcgacaccgtcaacccacccgtcaaagcccag
gaacgcctctacgacttcatcgtccaggcccatgagcaacagcccaagctggacattgtg
atgatcgccggcaaccacgactccggttcgcgcatcgagctgcccgccgcactcatgcgc
cgcctgcgcacccatgcgttgggccgtgtgcactggctggacgagggccagctggatgcc
gagcgcctgctgatccctctgaccaacggccggggcaaggtcgctgcctggtgcctggcc
ctgcccttcctgcggccggccgaagtcaccggcccgcagctgggtgacgattacctgcaa
ggcatcacccaggtgcaccagcaactgatcgccgccgccctgaagaaacgcaagaaagac
caggcgctgatcgccatcagccacgcgcacatggccggtggcgcggtgtcggaagactcc
gaacgcagcctgatcatcggcaacgccgaggcgctgccggccaagctgttcgacaaggct
atcagctacgtcgccctgggccatctgcacaaaccgcagaaggtcaaccgcgaagaacgc
atccgctacagcggctcgccaatcccgctgtcgttcgccgaaatcaactacccgcaccag
gtcctggaagtggagctggacggcaacggcctggtcagcgtcgagccacgccccgtacca
cgcgccgtggccctgcaacgggtgggcccggcaccgctgggcgagctgttgcagcaactg
gccgacctgcccgtgatcgacctgcttgaagaccccaaccgccagccctggctggaggtg
cgggtgatgctcgacgagccgcaacccgacctgcgccagcagatcgaaaccgcgcttgaa
ggcaaggcggtacggttgatccgcatcagcgccgagtacgccggccgcaacaacgccgag
gacgatgacctggcctttgtcgaactggcccagatgaccccgcaagacctgttcagccgc
gcctgggagcaagcctacggcaaccccgccgacgagcaggcgctggccgacttcgccctg
ctgttgcaggacgtgcagcaggaagaggaacagccatga
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