Pseudomonas putida ND6: YSA_01738
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Entry
YSA_01738 CDS
T02170
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_01738
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YSA_01738
Archaeal homologous recombinant proteins
YSA_01738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
nSTAND3
RsgA_GTPase
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AFK67719
UniProt:
I3UQE8
LinkDB
All DBs
Position
923247..926891
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNAIGREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA
NGKLQHSRQSFYDLDSEQVLGSGKNEYKQLVEARLGLSFEQFTRAVMLAQSEFGAFLKAD
DKDRSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKERANHLLPMAAEARTELDQRL
EQAQQQFKADQAGERQLEQQRNWLNEQRQLQAQHTEASTTLQAAELDWQQLAEPRLDLAR
LERLAPQRHQFHRRQALSAQLAPVAAKMAEQQQQQAELQVRTRELEQALDTARQALADRQ
AQHSENAPRLRQAFAAQDSLARLDQELAAQRSISQQAQQQVADGQQQLQQLEDNQQRSVQ
QLAQIDTALADSQHLAGLANAWHAYLPQLKQVMLIGGRLTKGREELPGLQAQASQANAHL
QAERDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVEEMSRLHGREQELRQQLD
ALRERQQQAMLQRQQLITEGTAAKAELEAAEQALILTRQLLERQRLARNTSVEELRDQLR
DGEPCPVCGSAEHPFHQPEALLQSLGRHDQAEEHAAQKQVETLNNKLVELRTQLGVVNAQ
LKDFQQQQQQLGEQLQPLVAQVQAHSLWPALAPQDDKARSTWLDSQLRRLDEEISQDEKR
QSALLALQKDAARLNQQLQAAHDAQQQAQRHLEQQHQALANDEQLLQQGLNDLAGVLPEE
ALKALNDDPANAFLALDQQIAQRLQQLEQRKDEQEEQQARQAQLDKLRDQQQARVQGLQQ
LQHTLAALDEQRQQAQASLGELLGEHASAEAWQQHMEATLEQARALDADTAQRLQDLRTQ
GVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMDDAQVNELRQ
RLQAAEKAIEQGRVLLQEREQRLQQHAAQMTVDTSAEALEHALTELRGRLVNHEQQCAEL
RAQQADDQRRQQAHQALAAEIEQAHQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctggcatcgctggccggcccgatcgacatc
gatttcaccgcagaaccgttggccagcgctggcctgttcgccatcaccgggcctaccggt
gctggcaagagcaccttgcttgacgccctgtgcctggcgctgttcggcaccgtgccgcgc
ctcaatgccattggccgtgaggccaaggtgccggacgccgacggtgacatccccacctcc
gacccgcgcaacctgctgcgccgtggcaccggcagcgggtttgccgaggtcgatttcgtc
ggcatcgacggccgccgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggcc
aacggcaaactgcagcacagccgtcaaagcttctacgacctcgacagcgagcaagtgctc
ggcagtggcaagaacgaatacaagcaactggtcgaagcccgtctgggcctgagctttgaa
cagttcacccgtgcggtgatgctggcccagagcgagttcggcgcgttcctcaaggccgac
gacaaagaccgtagcgagttgctggaaaagctcaccaacaccgcgatctacacccgcctg
ggccagcgtgccttcagcaaggcgcgcgaagccggcgaggcgcacaacgccctgaaagaa
cgcgccaaccatctactgccgatggctgccgaggcccgtaccgagctcgaccagcgcctg
gagcaggcgcaacagcagttcaaggccgaccaggccggcgagcgccaactggagcagcaa
cgcaactggctgaatgaacaacgccagctacaggcccaacacaccgaagccagcaccacg
ctgcaggccgccgaactggactggcaacagctggccgaaccacgcctggacctggcacgt
ctggagcgcctggccccacagcgtcaccagttccaccgccgacaggccctgagcgcacag
ctggcgccagtggccgcgaaaatggccgaacagcaacagcagcaagccgaactgcaggtg
cgcacccgcgaactcgaacaggcgctggacactgcgcgccaagcgcttgccgaccgccag
gcccagcacagcgagaacgcgccgcgcctgcgccaggcttttgccgcgcaggacagtctg
gcacgcctggaccaggagctggccgcccagcgcagcatcagccaacaggcgcaacaacag
gtcgctgacggccagcagcaactgcagcagctggaagacaaccagcagcgcagcgtgcag
caactggcgcagatcgacaccgcgcttgccgacagccagcacctggcgggcctggccaat
gcctggcacgcctacctgccgcaactgaaacaggtgatgctgatcggtggccgcctgacc
aagggccgagaagagctacccggcttgcaggcccaggccagccaggccaatgcgcacctg
caggccgagcgcgacgcctacgacctgttgttccgtgaagccaaggccgaaccccaggcc
ctggccgaacagatcgacctgctcggcggcatgctgcaggacaaccgcaaacagcagcgc
gccgtagaagaaatgtcacgcctgcacggccgtgaacaggagctgcgccagcagctggat
gccctgcgcgaacggcagcagcaggccatgctgcaacgccagcaactgattaccgaaggc
accgccgccaaggccgagctggaggccgccgagcaggcgttgatcctcacccgtcaactg
ctggaacggcaacgcctggcacgcaacaccagcgtcgaagaactgcgtgaccaactgcgt
gacggcgaaccctgcccggtctgtggcagcgccgaacaccccttccatcagccagaagcg
ctgctgcagagcctgggtcgccatgaccaggccgaagagcacgccgcgcagaagcaggtc
gaaacgctcaacaacaagctggtggagctgcgtacccagctgggtgtggtcaatgcccag
ctcaaggactttcagcagcaacagcagcaactgggcgaacagttgcaaccgctggtggct
caggtacaggcacacagcctatggccagccctcgccccgcaggacgacaaggcccgtagc
acctggctcgacagccagctgcgtcgcctggatgaagaaatcagccaggacgagaaacgc
cagagcgccctgctggccctgcaaaaagacgccgcccgcctgaaccagcaattgcaggcg
gcccacgacgcccagcaacaggcccaacgccatctggagcaacagcaccaggccctggcc
aacgacgaacagctgttgcagcaaggcctgaacgacctggccggcgtactgccagaggaa
gcgctcaaggccctcaacgacgacccggccaatgccttcctcgccctcgaccagcagatt
gcccagcgcctgcagcaactggaacagcgcaaggacgaacaggaagaacagcaagcccgg
caagcccagctggacaaactgcgcgatcagcaacaggcgcgcgtgcaaggcctgcagcag
ttgcaacacacactcgcggccctcgacgaacagcgccagcaggcccaggcgtcgctcggc
gagctgctaggcgaacatgccagtgccgaagcctggcagcagcatatggaagccacgctg
gaacaagcccgcgccctcgatgccgacaccgcccagcgcctgcaagatctgcgcacccaa
ggcgtgcaactggccagcgagctcaaggccaatacccagcaacaacaggcactggatgcc
gaatgccaacagttgcaggcccagatcgcccagtggcgcagcgagcatccggaactggac
gatgccggcctcgatcgcctgctggccatggatgacgcgcaagtcaatgaattgcgccag
cgtttgcaagccgcggaaaaagccatcgagcagggccgcgtgctgctgcaggaacgtgag
cagcgcctgcaacaacacgccgcacaaatgaccgtggacacctcggccgaagccttggaa
cacgccctgaccgagctgcgcgggcggctggtcaaccatgagcagcaatgcgccgaattg
cgtgcacaacaggccgacgatcagcgccggcagcaggcccaccaggcgctggcggcagaa
atcgaacaggcccaccagcagtggcaacgctgggcccgcctcaatgccctgatcggttcg
gcctccggtgatgtgttccgcaagatcgcccaaggctacaaccttgatctgctgctgcac
cacgccaacgcccagctacgtcagctggcccgtcgctaccgcctcaagcgcggcggcagc
gcccttggcctgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcactcg
ttgtcgggcggggaaaccttcctggtgtcgctggccctggcgctgggcctggcgtcgatg
gcgtccagcaccttgcgtatcgagtcgctgttcatcgacgaaggcttcggcagcctcgac
cccgagtcgctgcaactggcaatggacgccctcgacggcttgcaagcccagggccgcaaa
gtggcggtgatttcccacgtacaggaaatgcacgagcgcatcccggtccagatccaggtg
cggcgccagggtaatggcctcagtgacgtggaggtgtgcgggtga
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integrated database retrieval system
