Pseudomonas putida ND6: YSA_01837
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Entry
YSA_01837 CDS
T02170
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppi03016
]
YSA_01837
Enzymes [BR:
ppi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
YSA_01837
Transfer RNA biogenesis [BR:
ppi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSA_01837
Prokaryotic type
YSA_01837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AFK67770
UniProt:
I3UQJ9
LinkDB
All DBs
Position
complement(980712..981572)
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AA seq
286 aa
AA seq
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MLLDIIDTATAESAAEGYSRIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEP
ISVVCAGRTDAGVHGCGQVVHFDTRAVRDERAWTMGTNFNLPHDISVVWSRPMPADFHAR
FKACARRYRYVIYNDPIRPAHLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAFRASQCQ
AKSPIKHIYHLRVTRHGQMIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEG
RNRREGGVTAHPYGLYLVQVEYPEAFALPKRYIGPHFLSGYEALAD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgctcttggacatcatcgacaccgctaccgccgaatccgcggccgaaggctactcccgc
atcgccctgggcgtggaatacaaaggcgcgcgctaccgcggctggcaacgtcaggccagc
ggcgtgccgagtgtccagcaagccctggagcaagcgctgtccaaggtcgccaacgagccg
atttcggtggtctgcgccgggcgtaccgacgccggcgttcacggctgcgggcaggtcgtg
cacttcgatacccgtgccgtgcgtgacgagcgcgcctggaccatgggcaccaacttcaac
ctgccgcacgacatcagtgtggtctggtcgcggccaatgccggccgactttcatgcccgc
ttcaaggcctgcgcccggcgctaccgctacgtcatctacaacgacccgattcgcccggcg
cacctggccgaagaagtgacctggaaccaccgtccgctggacgtcgatcgcatggccgag
gcggcgcagtacctgctcggtacccacgacttcagcgccttccgtgccagccagtgtcag
gccaagtcaccgatcaagcacatctaccacctgcgtgttacccgccatggccagatgatc
gtgctggacgtgcgtgccaccgccttcctgcaccacatggtgcgtaacattgccggtgtg
ctgatggccatcggcgccggcgagcgtccggttgcctgggcgcgcgaggtgctggaaggg
cgcaaccgccgtgaaggtggggtaacggcacacccatacgggctttacctggtgcaggtg
gagtaccccgaagcgtttgcgttgcccaagcgttacatcggcccacactttttgagtggt
tacgaggcgttggcagactga
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