Pseudomonas putida ND6: YSA_02519
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Entry
YSA_02519 CDS
T02170
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YSA_02519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_02519
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
YSA_02519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AFK68135
UniProt:
I3URL4
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All DBs
Position
1358826..1361399
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AA seq
857 aa
AA seq
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MSDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG
QSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDD
WPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY
AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMA
SRLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRFEKLQPQLKEIGDIERILARIGLRNAR
PRDLARLRDALGALPELQNAMTELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIRD
GGVLKAGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELPTKQ
AEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLISHLAP
LQDSAAALAELDVLSNLAERALNLDLSCPRFVDEPCLRIEQGRHPVVEQVLTTPFVANDL
GLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY
TLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
TAVIQRAREHLGRLETTSLPHEQPAAHKAKDAPQVPHQSDLFASLPHPAIEKLGKLQLDD
MTPRQAIEMLYQLKNLL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctttccgcacacaccccgatgatgcagcagtactggaagctgaaaaaccag
cacccggaccagctgatgttctaccgcatgggcgacttctacgagatcttctacgaagat
gcgaaaaaggccgcgaaactgctggatatcaccctgaccgcccgcggtcagtcggccggc
cagtccattcccatgtgcgggattccgttccattcgctggaaggctacctggccaagctg
gtcaagcttggcgagtcggtggtgatctgtgagcagatcggcgaccccgccaccagcaag
ggcccggtggagcgccaggtagtacgcatcatcacccccggcacggtcagtgacgaggca
ctgctcgacgagcgccgcgacaacctgatcgccgcactgctcggtgacgagcgcctgttc
ggcctggcggtactggacatcaccagcggcaatttcagcgtgcaggagatcaagggctgg
gaaaacctgctggccgaactcgagcgcctgaacccggtcgagctgttgatccccgacgac
tggccacgggacctgcctgcggagaaacgcccaggcgcccgccgccgcgcaccctgggac
ttcgaccgcgactcggcacgcaaggccctgtgccagcagttcgcgaccaaggacctcaag
ggcttcggctgcgacaagctgaccctggccatcggcgccgccggctgcctgctgacctat
gccaaggaaacccagcgcaccgccctgccgcacctgcgcagcctgcgccacgagcgtctg
gacgatacagtcatcctcgatggggccagccgccgcaacctggagctggacatcaacctg
gccggtgggcgcgacaacaccctgcaatcggtgatcgaccgctgccagaccgccatggcc
agccgcctgctgagccgctggctgaaccgcccgctgcgcgacctcaaggtgctgcaagca
cgccaggactcgatccgctgcctgctcgacagctaccgcttcgaaaagctgcagccgcag
ttgaaggaaattggcgatatcgagcggatcctcgcccgtattggcctgcgcaatgcccgc
ccgcgcgacctggcacgcctgcgcgatgcgctgggcgcgctgccagaactgcagaacgcc
atgaccgagctcgaagcgccgcacctggcgcgtctggcggccattaccggtacctatccg
gagctggccagcctgctggagcgggcgatcatcgataacccgccggcggtgatccgcgac
ggcggtgtactgaaagccggctatgacaacgaactggacgagctgctggcaatcagcgag
aacgccggtcagttcctgatcgacctggaagcccgggaaaaggcccgcaccggccttgcc
aacctcaaggtcggctacaaccgcgtgcacggctacttcatcgaactgccgaccaagcag
gccgagcaggccccgggcgactacatccgccgccagaccctcaaaggcgccgagcgcttc
atcaccccggagctgaaggcgttcgaggacaaggcattgtcggccaagagccgcgccctg
gcccgcgagaagatgctctacgacgcgctgctggaaaccctgatcagccacctggcaccg
ctgcaggacagcgccgccgccctggccgaactggatgtgctcagcaacttggccgagcgc
gcactgaacctcgacctgagctgcccacgctttgtcgacgagccttgcctgcgcatcgag
cagggccgccacccggtggtggaacaggtactgaccacgccgttcgtggccaacgacctg
ggcctggacaacagtacgcgcatgctgatcatcaccggccccaacatgggcggtaagtcg
acctacatgcgccagactgcgcttatcgtgctcctggcccacatcggtagcttcgtgccg
gcagccagctgcgagctgtcgctggtcgaccgcatcttcacccgcatcggctccagtgac
gacctggccggcgggcgctcgaccttcatggtggagatgagcgaaaccgccaacatcctg
cacaacgccaccgaccgcagcctggtgctgatggacgaagtgggccgcggtaccagcacc
ttcgatggcctgtcgctggcctgggctgccgccgagcgcctggcccagctgcgtgcctac
acactgttcgccacccactacttcgaactgaccgtgctgccggagagcgagccgctggtg
gccaacgtgcacctgaacgccaccgagcacaatgaacgcatcgtgttcctgcaccacgtg
ctacccggccctgccagccaaagctacggcctggccgttgcgcagctggccggcgtaccg
acggcagtgatccagcgtgcccgcgagcaccttggccggctggaaaccaccagcctgccc
catgagcagcctgcggcccacaaggccaaggacgcgccgcaagtgccgcaccagagcgac
ttgtttgccagcctgcctcatccagccatcgagaagctgggcaagctgcaactggacgac
atgaccccgcgtcaagctatcgaaatgctatatcaactaaagaacctgttataa
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