Pseudomonas putida ND6: YSA_02604
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Entry
YSA_02604 CDS
T02170
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00300
Lysine biosynthesis
ppi01100
Metabolic pathways
ppi01120
Microbial metabolism in diverse environments
ppi01230
Biosynthesis of amino acids
Module
ppi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YSA_02604
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppi01002
]
YSA_02604
Enzymes [BR:
ppi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
YSA_02604
Peptidases and inhibitors [BR:
ppi01002
]
Metallo peptidases
Family M20
YSA_02604
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Glyco_transf_20
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AFK68183
UniProt:
I3URR2
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All DBs
Position
1411534..1412586
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AA seq
350 aa
AA seq
DB search
MMNRLGAVGFQLEPMRIEDVDNFWATHGSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEAL
IDADGMLCGRGAADMKGSLASMVIASERFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVV
ERLKARNERLDWCIVGEPSSTTLLGDVVKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIH
LAAPALAELAAEHWDEGNAFFPPTSFQISNLNSGTGATNVVPGELTALFNFRFSTESTVE
GLQARVSAILDKHELDWSVDWALSGLPFLTEPGELLDAVAASIKGVTGRDTQPSTSGGTS
DGRFIATMGTQVVELGPVNATIHQVDERILASDLDLLTEIYYQTLVRLLA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgtctgggcgccgtcggtttccagctggagccgatgcgcattgaagacgtc
gacaacttctgggccacccacggcagccaggacggcccggtactgtgttttgccggccac
accgacgtggtgcctaccggcccggtccagcaatggcagcatgaacccttcgaggcactg
atcgacgccgacggcatgctctgtggccgtggcgccgccgacatgaagggcagcctggcg
tccatggtcatcgccagcgagcgcttcgtgcaggactacccgaaccaccgcggcaaggtc
gcgtttctgatcaccagcgacgaggaaggcccggctcaccacggcaccaaggcggtggtc
gagcgcctgaaagcgcgcaacgagcgtctggactggtgcatcgtcggcgaaccgtccagc
accaccttgctgggtgacgtggtcaagaacggtcgccgtggttcgctgggcgccaagctg
accatacgcggcaaacagggccatgtggcctacccgcatctggcgcgcaacccgatccac
ctggccgccccggccctggcggaactggctgccgaacactgggacgaaggcaacgcgttc
ttcccacccaccagcttccagatctccaacctcaattccggcaccggcgccaccaacgtg
gtcccgggcgagctgaccgcgctgttcaacttccgcttttccaccgagtccaccgttgaa
ggcttgcaggcgcgggtgtcggcgattctcgacaagcatgaactggactggtcggtcgac
tgggcactgtcgggcctgccgttcctgaccgaaccaggcgagctgctcgacgccgtggcg
gccagcatcaagggtgtcaccggccgtgatacccagccctccaccagcggcggcacctcc
gatggtcgcttcatcgcaaccatgggtacccaggttgtcgaactcggcccggtcaacgcc
accatccaccaggttgacgagcggatcctggccagcgacctcgatctgctgaccgaaatc
tactaccagaccctggttcggttgctcgcctga
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