Pseudomonas putida ND6: YSA_02779
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Entry
YSA_02779 CDS
T02170
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppi03019
]
YSA_02779
03009 Ribosome biogenesis [BR:
ppi03009
]
YSA_02779
03036 Chromosome and associated proteins [BR:
ppi03036
]
YSA_02779
Enzymes [BR:
ppi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
YSA_02779
Messenger RNA biogenesis [BR:
ppi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YSA_02779
Ribosome biogenesis [BR:
ppi03009
]
Eukaryotic type
90S particles
RNase
YSA_02779
Prokaryotic type
rRNA processing factors
YSA_02779
Chromosome and associated proteins [BR:
ppi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
YSA_02779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AFK68279
UniProt:
I3US08
LinkDB
All DBs
Position
complement(1507816..1508505)
Genome browser
AA seq
229 aa
AA seq
DB search
MSASLAGLERKLGYTFKNQDQMLLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMDTARERILAWLADEFEGLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcccttgccggtctggagcgaaagctcggttacaccttcaagaaccaggac
cagatgctcctggcactgacccatcgcagttacgccgggcgcaacaatgagcgcctggag
ttcctcggtgacgccattctcaacttcgttgccggcgaagcgctgttcgagcgttttccg
caggcccgcgaaggccagttgtcgcggctgcgtgcgcggttggtcaagggagagaccctg
gcccgtctggcccgtggttttgatctgggcgattacctgcgcctgggttccggagaactc
aagagcggcggctttcgccgcgagtcgatcctggccgacgccctggaggcactgattggt
gccatctacctggacgctgacatggacaccgcccgggagcgcatcctggcctggctggcc
gatgagtttgaaggcctgacactggtcgacaccaataaagatccgaaaacccgcctgcaa
gagttcctgcagtcgcgcagctgtgagctgccgcgttacgaagtcgtggatatccagggt
gaaccacactgccggaccttcttcgtcgaatgcgaagtggtactgctgaacaacaagagc
cgtggtcaaggcgttagccggcgtattgccgagcaagtcgccgccgcgtctgcactgatc
gccctaggcgtggagaatggcaatgactga
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