Pseudomonas putida ND6: YSA_03227
Help
Entry
YSA_03227 CDS
T02170
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_03227
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YSA_03227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
AAA
Rad51
RecA
SLFN-g3_helicase
DUF7125
nSTAND3
AAA_24
NTPase_1
AAA_14
MCM
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AFK68520
UniProt:
I3USP9
LinkDB
All DBs
Position
complement(1743016..1744386)
Genome browser
AA seq
456 aa
AA seq
DB search
MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQQAQI
KTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAVGM
PALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVIDSIQTIF
TEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYF
EGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVMAT
WEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVV
GGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAKHG
FKRAIVPKGNAPKEAPAGLQVIAVTRLEQALDALFE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcttgtatggctgcaccgaatgcggcgcgaccttccccaaatgg
gccggccagtgcggcgaatgcggggcctggaacaccctggtcgaaaccatgatcgaaagc
ggcggcgctgctgcacccagtagcggccgcgctggctggacaggacagcaagcgcagatc
aagaccctggccgaagtcagtgtcgaggaaatcccgcgtttcacgaccagcagcaccgaa
ctggaccgcgtgctgggtggcggcttggtggatggctcggtggtgctgattggcggtgac
cccggcatcggcaagtcgaccattttgctacagaccttgtgcaacatcgccgtgggcatg
ccggcactgtatgtcacgggggaggagtcgcagcagcaggtggccatgcgctcgcggcgg
ctgggcctaccccaggaccagctcaaggtgatgaccgaaacctgcatcgagacgatcatt
gccacagcgcgggtcgagaagccgcgggtaatggtgatcgactcgatccagaccattttc
accgagcagttgcaatcggccccgggcggcgtggcccaggtgcgcgaaagcacagcgttg
ctggtgcgctacgccaagcaaagcggtacggcaatcttcctggtcggccacgtgaccaag
gaaggctcgctggctggcccaagggtgctggagcacatggtcgacacggtgctgtatttc
gaaggtgagtccgatggccggctgcgcttgctgcgggcggtcaagaaccgctttggcgcg
gtcaacgagctgggcgtgttcggcatgaccgatcgtggtctcaaggaggtatccaacccg
tcggcgatcttcctcaaccgtactcaggaagaggtgccgggtagcgtggtgatggcaacc
tgggagggtacccggccaatgctggtcgaggtgcaggcgctggtcgacgatagccatctg
gccaacccgcggcgggtaaccttgggcctggaccagaaccgcctggccatgttgttggcg
gtgctccaccgccatggcggtatcccgacccatgaccaggatgtgtttctcaacgtggtc
ggcggagtgaaggtgctggaaacggcttcggacctggcgctgctggcggcggtgatgtcc
agcttgcgtaaccggccactggcccacggtttgctggtgtttggcgagattggcttgtcg
ggcgaggtacggccggtgcccagtggtcaggagcgcttgaaggaagcggccaagcacggc
ttcaagcgtgccatcgtacccaagggcaatgcgccgaaagaagcgcctgcgggtttgcag
gtgattgccgttacccgcctggaacaggcgctggatgcattgttcgaatag
DBGET
integrated database retrieval system
