Pseudomonas putida ND6: YSA_03277
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Entry
YSA_03277 CDS
T02170
Name
(GenBank) diguanylate cyclase
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
YSA_03277
Enzymes [BR:
ppi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
YSA_03277
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
Motif
Other DBs
NCBI-ProteinID:
AFK68552
UniProt:
I3UST1
LinkDB
All DBs
Position
complement(1771680..1772951)
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AA seq
423 aa
AA seq
DB search
MKPTRKRTVRPTLRSVLGRGHLSVALLAVGLAGISLTLLGVLALRVYANHNLQLIARSIN
YTVEAAVVFDDSAAANESLALIASTEEVAEAKVFNNEGEQLAHWQRDNTGMLAQLEVQVA
SALLDEPVILPIVHQQQQVGHIELAGQGRSLLLFLLSGLAGILFCTVLSALAAQYLSRRL
LSDITRPLRGLASVAHAARRERSFDRRVPEAPIAELNELGNDFNALLDELDVWHSHLQSE
NQTLAHQASHDSLTGLPNRAFFEGRLSRSVRNAARQQDHLALLFLDSDHFKQINDTLGHA
VGDEVLISVAERVRAQLREHDLVARLGGDEFAVLLTPLHTRKDAEHIAEKIVASMKLPVQ
LDSGRSISTSLSVGIAYYPDDGADPASLLNAADAAMYQAKRERRGHWQLAQTERSANEIR
NRS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgacccgcaagcgtacggtgcgcccgaccctgcgctcggtgctgggccgtggt
caccttagcgtcgccttgcttgccgttggcctggcgggtatctccctcaccctgctgggc
gtgctcgccctgcgtgtctatgccaaccataacctgcagttgatcgcccgctcgatcaat
tacacggtagaggcggcggtggtgttcgatgacagcgccgctgccaatgagtcgctggcg
ttgattgccagtaccgaagaagtggccgaggccaaggtcttcaacaacgagggcgagcaa
ctggcgcactggcaacgcgacaataccggcatgctcgcgcagctggaggtgcaggttgcc
agcgccttgctggatgagccggtcattttgccgatcgtgcaccagcaacagcaggtcggg
cacatcgagctggcaggccagggcaggagcctgttgctgttcctgctcagtggcttggcc
ggtatcctgttctgcacggtcctcagcgccttggctgcccagtatctgtcgcggcgcctg
ctcagcgatatcacccgcccgctgcgtggcctggccagtgtcgcccatgccgcccgccgc
gagcgcagcttcgaccggcgcgtaccagaagcgccgattgccgagctgaacgagctgggt
aacgacttcaatgccctgctggatgaactggatgtgtggcatagccacctgcagagcgaa
aaccagacccttgcccatcaggccagccacgacagcctgaccggcttgcccaaccgcgcc
ttctttgaaggacgcctgagccgcagcgtgcggaatgcggcgcgtcagcaggaccacctg
gcactgctgttcctcgacagcgaccacttcaagcagatcaacgacaccctcggccacgcc
gtgggtgacgaggtgttgatcagcgtggccgaacgtgtacgcgcccaactgcgcgagcac
gatctggtggcgcgcctggggggcgacgagtttgccgtgctgttgacgccgttgcatacg
cgcaaggacgccgaacacattgccgagaagatcgttgccagcatgaagctgccggtgcaa
ctggacagtggccgcagtatctccacctcgctgagtgtcggtattgcctattacccggat
gacggcgctgaccccgccagtcttctcaatgccgccgatgcggcaatgtaccaggccaag
cgcgaacgccgtggccattggcaactggcgcagacggaacggtccgccaacgaaatcagg
aacaggagttga
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