Pseudomonas putida ND6: YSA_03382
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Entry
YSA_03382 CDS
T02170
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppi03016
]
YSA_03382
Enzymes [BR:
ppi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YSA_03382
Transfer RNA biogenesis [BR:
ppi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSA_03382
Prokaryotic type
YSA_03382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AFK68602
UniProt:
I3USY1
LinkDB
All DBs
Position
complement(1830495..1831412)
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AA seq
305 aa
AA seq
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MAQVKRIRRNISGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTRDVTVGRADIEALLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLVSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaatatcagcggcatcatcctgctcgacaagccg
ctgggcttcacgtccaatgccgccttgcagaaagtgcgttggctgctgaacgcggaaaag
gccggccataccggtagcctcgacccgctggcgaccggcgtgttgccgctgtgcttcggt
gaagcgaccaagttttcgcagtacttgctggattccgacaagggctacgaaaccgtcatg
cagatggggcagactaccaacaccggcgatgccgagggtgaggtgctgcagacccgcgac
gtgaccgttggtcgcgccgacatcgaagcgctgctgccccgttttcgcggcccgatcagc
cagataccgcctatgtactcggcgctcaagcgtgacggccagccgctgtacaaactggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctcgagtgcgaaggcacccgtgcacggttgagcgtaggatgcagcaaaggcacctatatc
cgcacgctggtggaggatatcggtgaagcccttggttgcggcgcctatgtcgccgagctg
cgcaggacccaggcagggccctttgcgctggcacagacggtcaccctcgaggaactcgaa
caggcccatgccgaaggtggcaacgaagcgctcgaccgcttcctgatgccatcggacagc
gggctgcaggactggccgttggtcagcctgtcggaacacagtgcgttctactggctgcat
ggccaggcggtacgcgcgccggacgcgccacaatttggcatggtgcgggtacaggatcac
aatgcacgcttcatcggtatcggtgaggtgagcgaagacgggcgcattgcgccgcgtcgg
ctgattcggtcggaatga
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