Pseudomonas putida ND6: YSA_03388
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Entry
YSA_03388 CDS
T02170
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppi03021
]
YSA_03388
03009 Ribosome biogenesis [BR:
ppi03009
]
YSA_03388
Transcription machinery [BR:
ppi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
YSA_03388
Ribosome biogenesis [BR:
ppi03009
]
Prokaryotic type
rRNA transcription factors
YSA_03388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_KhpA-B
DUF507
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AFK68605
UniProt:
I3USY4
LinkDB
All DBs
Position
complement(1834499..1835980)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPPGVIFEALEVALATATKKRFEDEVDLRVEINRHTGSYETFR
RWTVVDEADLDDPAIETWLDKIKDTHPEAKVGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERVGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIIPRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPQMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVAEDNLAQAIGRGGQNVRLASQLTGWTLNVMTEKDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAAELAVRGVVNREDLAEQSIDDLLDIDGIDEERA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgaatcggtatccaacgaaaaaggtgtaccgccc
ggcgtcattttcgaagcgctggaagtggccctggccactgcaaccaaaaaacgttttgaa
gacgaagtcgacctacgtgtggaaatcaaccgccacaccggtagctacgagactttccgt
cgctggaccgtggtcgacgaagccgatcttgatgatccggcgatcgagacctggctggac
aagatcaaggacacccaccctgaagccaaggtcggtgacgtgatcgaagagaagatcgag
tccatcgagttcggtcgtattgccgcccagaccgccaagcaggtcatcgtgcagaaggtc
cgtgaggccgagcgtgcccaggtggtcgatgcctaccgtgagcgcgttggcgagatcatc
tccggtaccgtaaaaaaggttacccgcgacaacgtcatcgttgacctgggcaacaacgcc
gaggccttgctggctcgcgaagacatcattccgcgcgaaaccttccgtgttggcgtgcgc
ctgcgtgcgctgctcaaggaaattcgcaccgaaaaccgtggcccacagctgattctgtcg
cgcaccgcgccgcagatgctgatcgagcttttccgcattgaagtgccggaaattgccgag
ggcctcatcgaagtcatggctgcttcccgtgatccgggttcgcgagccaagattgccgtc
cgctccaaggacaagcgtatcgatccgcaaggtgcctgtatcggcatgcgtggttcgcgc
gtccaggccgtatccggggagctgggtggtgagcgtgtggatatcgtcctgtgggacgat
aacccggcgcagttcgtcatcaacgccatgtcgccggctgaagtcgcggcgatcatcgtt
gatgaagatgcccatgccatggacatcgccgtcgccgaggacaacctggcccaggccatt
ggccgtggcggtcagaacgttcgcctggccagtcagttgaccggctggaccctgaacgtg
atgaccgagaaggacatccaggccaagcaacaggccgaaaccggtgacatcctgcgcaat
ttcatcgaggaactggaagtcgacgaggagctggcccaagtgctggtcgacgaaggcttc
accagccttgaagaaattgcctacgtaccgttggaagaaatgctcaacatcgatggcttt
gacgaagatatcgtcaatgagctccgcgctcgagccaaggaccgtttgttgaccaaggcc
atcgctaccgaagaaaaactggcagacgcccacccggccgaagacctgctctcccttgag
ggcatggacaaagacctggcggctgaactggcggtgcgcggcgtggttaaccgcgaagac
ctggccgagcagtcgatcgacgatctgctcgacatcgacggcatcgacgaagagcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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