| Entry |
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| Name |
(GenBank) DEAD/DEAH box helicase domain-containing protein
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| KO |
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| Organism |
ppi Pseudomonas putida ND6
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ppi00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YSA_04061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ppi03019]
YSA_04061
Enzymes [BR:ppi01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YSA_04061
Messenger RNA biogenesis [BR:ppi03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YSA_04061
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2186464..2188065
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| AA seq |
533 aa
MHDSFKVYARDLPLVSACIFGGVGMNPQIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHV
EILVLDEADRMLDMGFIHDVKKVLARLPAKRQNLLFSATFSKDITDLADKLLHNPERIEV
TPPNTTVERIEQRVYRLPASHKRALLAHLITLGAWEQVLVFTRTKHGANRLAEYLEKQGL
TAAAIHGNKSQNARTKALADFKANSVRVLVATDIAARGLDIDQLPHVVNFELPNVEEDYV
HRIGRTGRAGRSGEAISLVAPDEEKLLKSIERVTKQRIADGDLMGFDASQVEAEKPETRE
RPQNNGRGGRNQQARGEGAKDSNGGRKDKGKDKGKARQQAAAKPDDKEKSGDKQQQPRKP
RDKKPRPQQASNNGVPKPPADRDPEEFLDDEVDNFGNRADYVSPYQGKNQGRNRRPGGAG
QGQGQGNGQRSNAGGQGQARNGGQPRSGGGEKRPPRANNGGGARRDGGGGRGRPARDDAA
RQEPAVRNPRQPEKQPVIIRKESKLDRFPTPEQLDDLPSRPRGERPALLTRKG |
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| NT seq |
1602 nt +upstreamnt +downstreamnt
gtgcatgacagtttcaaagtctatgcccgtgacctgccactggtcagcgcctgcatcttc
ggcggcgttggcatgaacccgcagatccaggccattgccaaaggcgttgatgtgctggtc
gcctgcccaggccgcctgctcgacctggccggccaaggcaaggtcgacctggcccacgtg
gaaatcctggtacttgatgaagccgatcgcatgctcgacatgggcttcatccacgacgtc
aagaaggtgctcgcccgcctgccagccaagcggcagaacctgcttttctcggccaccttc
tccaaggacatcaccgacctcgccgacaagctcctgcacaacccggagcgtatcgaggtc
accccgccgaacaccaccgtcgagcgtatcgagcagcgggtgtaccggctgcctgccagc
cacaagcgtgccctgctggcgcacctgatcaccttgggcgcctgggaacaggtgttggtg
ttcacccgaaccaagcacggtgccaaccgcctggccgagtatctggaaaagcaaggcctg
accgccgccgcgatccacggcaacaagagccagaacgcccgcaccaaggctttggccgac
ttcaaggccaacagcgtgcgcgtactggtcgccaccgacatcgctgcccgcggcctggac
atcgaccagttgccccacgttgtcaacttcgagctgccgaatgtcgaggaagactacgtc
caccgcattggccgtaccggccgtgccggtcgttcgggcgaagctatttccctggtcgca
ccagatgaagaaaagctgctcaagagcatcgagcgggtgaccaagcagcgcatcgcggat
ggcgacctgatgggcttcgacgccagccaggtcgaagccgagaagcctgaaacacgcgag
cgcccgcaaaacaacggccgcggtggccgcaaccagcaagcccgcggcgaaggtgccaaa
gacagcaacggcggccgcaaggacaaaggcaaggacaaaggcaaagccaggcagcaagct
gcggccaagccggacgacaaggaaaagagcggcgacaagcagcagcagccgcgcaagccg
cgtgacaagaagccacgcccacagcaggccagcaataacggcgtgccgaaaccgccagca
gaccgcgacccggaagagttcctggacgacgaggtcgataacttcggtaaccgcgccgac
tatgtcagtccgtaccagggcaaaaaccagggccgcaaccgtcgcccaggtggtgctggc
caaggtcaggggcaaggcaatggtcaacgcagcaacgctggcggccaaggccaagcccgc
aatggcggccagccacgcagtggtggcggagaaaaacgcccgccccgcgccaacaacggt
ggcggtgcccgtcgtgatggcggcggtggccgtggtcgccctgcgcgtgacgatgctgcc
cggcaagagccggccgtgcgcaacccgcgtcagccggaaaaacagccagtgatcattcgc
aaggagtccaaactggaccgcttcccgacgcctgagcaactggatgacctgccaagccgc
ccacgcggtgagcgcccggcgctgctgacccgcaagggctga |
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