Pseudomonas putida ND6: YSA_04313
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Entry
YSA_04313 CDS
T02170
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YSA_04313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_04313
Enzymes [BR:
ppi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YSA_04313
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YSA_04313
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_16
Zn_ribbon_6
AAA_30
iSirtuin
HypA
AAA_25
TrwB_AAD_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFK69099
LinkDB
All DBs
Position
2336800..2339019
Genome browser
AA seq
739 aa
AA seq
DB search
MSDVILRLALPSPLRRLFDYKAPASMARQTLTPGMRIRVPFGRREMIGVLIEVCTQSEVP
ADKLKPATALLDPVSPIPASLFKLCLWTAQYYQHSLGDTLSWALPTLLRQGEAAEMRQER
FWHIAPGARLEDPRIARAPRQRDALKTLAQHPHGVAHSLLAKLNLNKDSLDLLLAKDLVQ
IETRRHLPALRHEHWLAQPELPLNEEQRDAFDAVCEGFGGFGAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRAHQENIPILLGS
ATPSLETLHNALTGRYRLLRMNQRAGGARPPRMLRLDVKSLPLDSGISGPLQQAIRQTLE
AGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRSGVLRCHHCGYDERLPHQC
PQCNHVDLRPVGAGTERAEERLKVLFPDYPILRVDRDSTARKDAMHNLFSTIQRGQPSIL
VGTQMLAKGHHFPRVTLVAILEADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALDERRAAGLPPYSHLALLRAEAHKPGQAESFLDEA
CAAAERLVAEQHLPGIELLGPVPAPMERRAGRFRAQLLIQANTRAPLHRLISAWLLVLEQ
LPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgtcatcctgcgccttgccctgccctctccgctgcggcgcctgttcgactac
aaggcgccggcgagcatggcgcgccagaccttgacccctggcatgcgcatccgcgtgccc
tttggccgccgcgaaatgatcggtgtgctgatagaggtgtgcacgcagagcgaagtgccc
gccgacaaactgaagccggccactgccctgctcgacccggtgtcccccatccccgcgtcg
ctgttcaagctgtgcctgtggaccgcccagtactaccagcatagcctgggcgataccctg
agctgggcgctgcccacgctactgcgccagggcgaagctgccgaaatgcgccaggaacgc
ttctggcacatagcccctggcgcccgcctggaggacccgcgcatcgcccgcgcgccgcgc
cagcgcgacgccctcaagaccctggcccagcacccgcacggcgtggcccacagcctgctg
gccaaactcaacctgaacaaggacagcctcgacctgctgctggccaaggatctggtgcag
atcgagacgcgccgccacttgccggccctgcgccatgagcactggctggcacagccggaa
ctccccctcaacgaagagcaacgcgatgccttcgacgccgtgtgcgagggctttggcggt
ttcggcgcgttcttgctggccggcgtcaccggcagtggcaagaccgaggtctacctgcaa
ctgatccgcgaaaccctggaagccggcaagcaggcgctggtgctgatcccggagatcaac
ctcggcccgcaaaccctggcccgcttcgagcaacgcttcaacgcgcgcattgccctgctg
cactctgcggtgaacgaccgcgaacgcctggatgcctggctggcggcacgggacggcgag
gccgatatcatcatcggcacccgctcggcattgttcacgccgatgaaaaaccccggcctg
atcatcatcgacgaagagcacgacggctcctataaacagcaggaaggcctgcggtaccac
gcccgcgacctggcactggtacgcgctcaccaggagaacatcccgatcctgctcggctcc
gccacaccgtcgctggaaaccctgcataacgccctgaccggccgctaccgcctgctgcgt
atgaaccaacgcgccgggggggcccgcccgccgcgcatgctgcgccttgatgtgaagagc
ctgccactggacagcggcatcagtggcccgctgcagcaggctatccgacagaccctggaa
gctggccaacaagtgctggtgttcctcaaccgccgcggctttgccccaaccttgctgtgc
cacgattgcggctggctgtccgaatgcccacgctgcgatgcgcgcatgaccgtgcaccag
cgctccggcgtgctgcgctgccaccactgtggctatgacgaacgcctgccgcaccagtgc
ccgcaatgcaaccacgtcgacctgcgcccggtcggtgccggtaccgagcgcgccgaagag
cgcctgaaggtgctgttcccggattatccgatcctgcgcgtggaccgcgacagcacggcg
cgcaaggacgccatgcacaacctgttcagcaccatccagcgcggccagccaagcatcctc
gtcggcacccagatgctcgccaagggccaccacttcccgcgggtgaccctggtggccatc
cttgaagccgatggtgggctgttttccggtgacttccgcgccagcgagcgcatggcacaa
cttatcgtacaggtggccgggcgggccgggcgggccgaagaacccggcaaggtcatcatc
cagacccacctggccgaccacccactgttggtccagctaaccgagcaaggctacttcgcc
ttcgccgaacaggccctggacgaacgccgagccgccgggctgccgccctactcgcacctg
gccttgctgcgtgccgaagcacacaagccggggcaggccgaaagttttctcgacgaagcc
tgtgccgccgccgagcgcctggtggccgaacagcacctgccgggcatcgaactgctgggc
ccggtaccggcgcccatggagcgccgcgccggacgattccgcgcacaattgttgatacag
gccaatacccgggcgccgttgcatcgactgatcagcgcctggttgctagtgttggaacag
ttgccgagcgggcgccaggtgcgctggtcgctggatgtcgacccggtagacctgtattga
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