Pseudomonas putida ND6: YSA_04349
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Entry
YSA_04349 CDS
T02170
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppi03021
]
YSA_04349
Transcription machinery [BR:
ppi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YSA_04349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
AFK69120
UniProt:
I3UUE9
LinkDB
All DBs
Position
complement(2354214..2355068)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTVEQERDLGERLYYEQDVEAARQMVMAHLR
FVVHIARSYAGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLSGQD
MAFDPAAEADDDSAFQSPAHYLEDHRYDPAVQLEDADWSDNSTSNLHEALQGLDERSRDI
LYQRWLAEEKATLHELADKYSVSAERIRQLEKNAMNKVKALIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgttgcaacctgcctatgccctggtacccggtgcaaacctggaagcctat
gtgcacacggtcaacagcatcccgctgctgacggtcgagcaggagcgtgatctgggcgag
cgtctctattatgagcaggatgtcgaggccgctcgtcagatggtgatggcccacctgcgt
ttcgtcgtacatatcgcccgtagttatgccggctacgggttggcccaggctgacctgatc
caggaaggcaatgtcggcctgatgaaagccgtcaagcgcttcaaccctgaaatgggtgtg
cgcctggtgtcgttcgctgtgcactggatcaaggcagagatccacgagttcattctgcgc
aactggcgcatcgtcaaagtggctaccaccaaggctcagcgcaagctgttcttcaacctg
cgtagccagaagaagcgcctggcgtggctgaacaacgacgaagtgcatcgcgtggcggaa
agccttggcgtcgagccgcgcgaagtgcgcgagatggaaagccgcctcagtggccaggac
atggccttcgatccggcagcggaagctgacgacgacagcgccttccagtcgcctgcgcat
tacctggaagaccaccgttacgatccggcggtgcagttggaggatgccgactggagtgac
aattccaccagcaacctgcacgaagcgctgcaaggtctggacgagcgtagccgcgacatt
ctctatcagcgttggctggcggaagagaaggccacgctgcacgaactggcagacaagtac
agcgtatcggctgagcgtattcgccagctggagaagaatgcgatgaacaaggtcaaggca
ctgatcgctgcctga
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integrated database retrieval system
